| Back to Multiple platform build/check report for BioC 3.15 |
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This page was generated on 2022-03-18 11:07:48 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the igvR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/igvR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 920/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| igvR 1.15.10 (landing page) Paul Shannon
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: igvR |
| Version: 1.15.10 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL igvR |
| StartedAt: 2022-03-17 16:10:57 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 16:12:24 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 87.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL igvR
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'igvR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
See system.file("LICENSE", package="MotifDb") for use restrictions.
** help
*** installing help indices
converting help for package 'igvR'
finding HTML links ... done
BedpeInteractionsTrack-class html
DataFrameAnnotationTrack-class html
DataFrameQuantitativeTrack-class html
GFF3Track-class html
GRangesAnnotationTrack-class html
GRangesQuantitativeTrack-class html
GWASTrack-class html
GenomicAlignmentTrack-class html
QuantitativeTrack-class html
RemoteAlignmentTrack-class html
Track-class html
UCSCBedAnnotationTrack-class html
UCSCBedGraphQuantitativeTrack-class html
VariantTrack-class html
displayTrack html
enableMotifLogoPopups html
getGenomicRegion html
getSupportedGenomes html
getTrackNames html
igvAnnotationTrack-class html
igvR-class html
ping html
removeTracksByName html
saveToSVG html
setCustomGenome html
setGenome html
setTrackClickFunction html
setTrackHeight html
showGenomicRegion html
showTrackLabels html
trackInfo html
trackSize-BedpeInteractionsTrack-method
html
trackSize-DataFrameAnnotationTrack-method
html
trackSize-DataFrameQuantitativeTrack-method
html
trackSize-GFF3Track-method html
trackSize-GRangesAnnotationTrack-method
html
trackSize-GRangesQuantitativeTrack-method
html
trackSize-GWASTrack-method html
trackSize-GenomicAlignmentTrack-method
html
trackSize-UCSCBedAnnotationTrack-method
html
trackSize-UCSCBedGraphQuantitativeTrack-method
html
trackSize-VariantTrack-method html
trackSize html
zoomIn html
zoomOut html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package can be loaded from final location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package keeps a record of temporary installation path
* DONE (igvR)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'GenVisR' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'SplicingGraphs' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'strandCheckR' is missing or broken
done