| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:41 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the graph package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graph.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 820/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graph 1.73.0 (landing page) Bioconductor Package Maintainer
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: graph |
| Version: 1.73.0 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL graph |
| StartedAt: 2022-03-17 15:28:26 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 15:29:56 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 89.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL graph
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'graph' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c graph.c -o graph.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o graph.dll tmp.def graph.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
mv graph.dll BioC_graph.dll
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'graph'
finding HTML links ... done
DFS html
IMCA html
MAPKsig html
MultiGraph-class html
acc-methods html
addEdge html
addNode html
adj-methods html
adjacencyMatrix html
apoptosisGraph html
attrData-class html
attrDataItem-methods html
attrDefaults-methods html
aveNumEdges html
biocRepos html
boundary html
calcProb html
calcSumProb html
clearNode html
clusterGraph-class html
clusteringCoefficient-methods html
combineNodes html
defunct html
distGraph-class html
duplicatedEdges html
edgeData-methods html
edgeDataDefaults-methods html
edgeMatrix html
edgeSets html
edgeWeights html
fromGXL-methods html
graph-class html
graph2SparseM html
graphAM-class html
graphBAM-class html
graphExamples html
graphNEL-class html
inEdges html
internal html
isAdjacent-methods html
isDirected-methods html
leaves html
listEdges html
matrix2Graph html
mostEdges html
multigraph html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/multiGraph-class.html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/show+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/isDirected+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/nodes+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/numNodes+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/edges+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graph/00new/graph/help/numEdges+2CmultiGraph-method.html
nodeData-methods html
nodeDataDefaults-methods html
numNoEdges html
pancrCaIni html
randomEGraph html
randomGraph html
randomNodeGraph html
removeEdge html
removeNode html
renderInfo-class html
reverseEdgeDirections html
settings html
simpleEdge-class html
standardLabeling html
subGraph html
toDotR-methods html
toDotWithRI html
ugraph html
validGraph html
write.tlp html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graph)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'FamAgg' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'matter' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'rsemmed' is missing or broken
done