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This page was generated on 2022-03-18 11:08:41 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for SEtools on riesling1


To the developers/maintainers of the SEtools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SEtools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1784/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SEtools 1.9.1  (landing page)
Pierre-Luc Germain
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/SEtools
git_branch: master
git_last_commit: 026bc24
git_last_commit_date: 2021-11-21 00:54:06 -0400 (Sun, 21 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: SEtools
Version: 1.9.1
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SEtools
StartedAt: 2022-03-17 16:00:44 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 16:01:52 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 68.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SEtools
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'SEtools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SEtools'
    finding HTML links ... done
    SE-heatmap                              html  
    aggSE                                   html  
    castSE                                  html  
    crossHm                                 html  
    data                                    html  
    flattenPB                               html  
    getBreaks                               html  
    log2FC                                  html  
    meltSE                                  html  
    mergeSEs                                html  
    qualitativeColors                       html  
    resetAllSEtoolsOptions                  html  
    scale2                                  html  
    se2xls                                  html  
    sortRows                                html  
    svacor                                  html  
    finding level-2 HTML links ... done

** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SEtools)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'MIGSA' is missing or broken
 done