Stijn Hawinkel
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/RCM |
| git_branch: master |
| git_last_commit: 167c723 |
| git_last_commit_date: 2022-03-02 04:43:43 -0400 (Wed, 02 Mar 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:26 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the RCM package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RCM.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1553/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| RCM 1.11.2 (landing page) Stijn Hawinkel
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: RCM |
| Version: 1.11.2 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL RCM |
| StartedAt: 2022-03-17 15:50:02 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 15:51:30 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 87.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL RCM
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'RCM' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RCM'
finding HTML links ... done
JacCol_constr html
JacCol_constr_noLab html
LR_nb html
LR_nb_Jac html
NBalphaInfl html
NBcolInfl html
NBjacobianAbunds html
NBjacobianCol html
NBjacobianColNP html
NBjacobianLibSizes html
NBjacobianPsi html
NBjacobianRow html
NBpsiInfl html
NBrowInfl html
RCM html
RCM_NB html
Zeller html
addOrthProjection html
arrayprod html
buildCentMat html
buildConfMat html
buildConfMat.character html
buildConfMat.data.frame html
buildCovMat html
buildDesign html
checkAlias html
constrCorresp html
correctXMissingness html
dLR_nb html
dNBabunds html
dNBlibSizes html
dNBllcol html
dNBllcolNP html
dNBllcol_constr html
dNBllcol_constr_noLab html
dNBllrow html
dNBpsis html
deviances html
ellipseCoord html
estDisp html
estNBparams html
estNBparamsNoLab html
estNPresp html
extractCoord html
extractE html
filterConfounders html
getDevMat html
getDevianceRes html
getInflCol html
getInflRow html
getInt html
getLogLik html
getModelMat html
getRowMat html
heq_nb html
heq_nb_jac html
indentPlot html
inertia html
liks html
plot.RCM html
plotRespFun html
residualPlot html
respFunJacMat html
respFunScoreMat html
rowMultiply html
seq_k html
trimOnConfounders html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RCM)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'HiCcompare' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'semisup' is missing or broken
done