Job van Riet
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/ProteoDisco |
| git_branch: master |
| git_last_commit: 24e9090 |
| git_last_commit_date: 2021-12-06 05:08:39 -0400 (Mon, 06 Dec 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:21 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the ProteoDisco package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ProteoDisco.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1482/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ProteoDisco 1.1.3 (landing page) Job van Riet
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: ProteoDisco |
| Version: 1.1.3 |
| Command: rm -rf ProteoDisco.buildbin-libdir && mkdir ProteoDisco.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=ProteoDisco.buildbin-libdir ProteoDisco_1.1.3.tar.gz |
| StartedAt: 2022-03-17 21:29:55 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:31:19 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 84.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: ProteoDisco_1.1.3.zip |
| PackageFileSize: 911.8 KiB |
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### Running command:
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### rm -rf ProteoDisco.buildbin-libdir && mkdir ProteoDisco.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=ProteoDisco.buildbin-libdir ProteoDisco_1.1.3.tar.gz
###
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* installing *source* package 'ProteoDisco' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'dplyr::failwith' by 'plyr::failwith' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::id' by 'plyr::id' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::summarize' by 'plyr::summarize' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::count' by 'plyr::count' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::desc' by 'plyr::desc' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::mutate' by 'plyr::mutate' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::arrange' by 'plyr::arrange' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::rename' by 'plyr::rename' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::summarise' by 'plyr::summarise' when loading 'ProteoDisco'
** help
*** installing help indices
converting help for package 'ProteoDisco'
finding HTML links ... done
ProteoDiscography html
ProteoDiscographyExample.hg19 html
checkProteotypicFragments html
dot-checkReferenceAnchor html
exportProteoDiscography html
generateJunctionModels html
generateProteoDiscography html
getDiscography html
importGenomicVariants.MAF html
importGenomicVariants html
importGenomicVariants.VCF html
importSpliceJunctions html
importTranscriptSequences html
incorporateGenomicVariants html
mutantTranscripts html
setGenomicSequences html
setMutantTranscripts html
setTxDb html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'dplyr::failwith' by 'plyr::failwith' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::id' by 'plyr::id' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::summarize' by 'plyr::summarize' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::count' by 'plyr::count' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::desc' by 'plyr::desc' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::mutate' by 'plyr::mutate' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::arrange' by 'plyr::arrange' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::rename' by 'plyr::rename' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::summarise' by 'plyr::summarise' when loading 'ProteoDisco'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'dplyr::failwith' by 'plyr::failwith' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::id' by 'plyr::id' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::summarize' by 'plyr::summarize' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::count' by 'plyr::count' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::desc' by 'plyr::desc' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::mutate' by 'plyr::mutate' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::arrange' by 'plyr::arrange' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::rename' by 'plyr::rename' when loading 'ProteoDisco'
Warning: replacing previous import 'dplyr::summarise' by 'plyr::summarise' when loading 'ProteoDisco'
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ProteoDisco' as ProteoDisco_1.1.3.zip
* DONE (ProteoDisco)