Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:08:20 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for PrInCE on riesling1


To the developers/maintainers of the PrInCE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PrInCE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1463/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PrInCE 1.11.0  (landing page)
Michael Skinnider
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/PrInCE
git_branch: master
git_last_commit: f854bc2
git_last_commit_date: 2021-10-26 12:49:58 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: PrInCE
Version: 1.11.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL PrInCE
StartedAt: 2022-03-17 15:54:19 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:55:28 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 68.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL PrInCE
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'PrInCE' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
Loading required namespace: PrInCE
Registered S3 method overwritten by 'quantmod':
  method            from
  as.zoo.data.frame zoo 
*** installing help indices
  converting help for package 'PrInCE'
    finding HTML links ... done
    PrInCE                                  html  
    finding level-2 HTML links ... done

    adjacency_matrix_from_data_frame        html  
    adjacency_matrix_from_list              html  
    aic                                     html  
    build_gaussians                         html  
    calculate_autocorrelation               html  
    calculate_features                      html  
    calculate_precision                     html  
    check_gaussians                         html  
    choose_gaussians                        html  
    clean_profile                           html  
    clean_profiles                          html  
    co_apex                                 html  
    concatenate_features                    html  
    detect_complexes                        html  
    filter_profiles                         html  
    fit_curve                               html  
    fit_gaussians                           html  
    gold_standard                           html  
    impute_neighbors                        html  
    is_unweighted                           html  
    is_weighted                             html  
    kristensen                              html  
    kristensen_gaussians                    html  
    make_feature_from_data_frame            html  
    make_feature_from_expression            html  
    make_initial_conditions                 html  
    make_labels                             html  
    match_matrix_dimensions                 html  
    predict_ensemble                        html  
    predict_interactions                    html  
    replace_missing_data                    html  
    scott                                   html  
    scott_gaussians                         html  
    threshold_precision                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PrInCE)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'lisaClust' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'SimBindProfiles' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'sva' is missing or broken
 done