Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJK[L]MNOPQRSTUVWXYZ

This page was generated on 2022-03-18 11:07:53 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for LOLA on riesling1


To the developers/maintainers of the LOLA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/LOLA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1015/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LOLA 1.25.1  (landing page)
Nathan Sheffield
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/LOLA
git_branch: master
git_last_commit: 35339f0
git_last_commit_date: 2021-11-20 04:45:32 -0400 (Sat, 20 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: LOLA
Version: 1.25.1
Command: rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=LOLA.buildbin-libdir LOLA_1.25.1.tar.gz
StartedAt: 2022-03-17 21:17:54 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:19:12 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 77.8 seconds
RetCode: 0
Status:   OK  
PackageFile: LOLA_1.25.1.zip
PackageFileSize: 1.238 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=LOLA.buildbin-libdir LOLA_1.25.1.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'LOLA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'LOLA'
    finding HTML links ... done
    LOLA                                    html  
    buildRestrictedUniverse                 html  
    checkUniverseAppropriateness            html  
    cleanws                                 html  
    countOverlapsAnyRev                     html  
    extractEnrichmentOverlaps               html  
    getRegionFile                           html  
    getRegionSet                            html  
    lapplyAlias                             html  
    listRegionSets                          html  
    listToGRangesList                       html  
    loadRegionDB                            html  
    mergeRegionDBs                          html  
    nlist                                   html  
    plotTopLOLAEnrichments                  html  
    readBed                                 html  
    readCollection                          html  
    readCollectionAnnotation                html  
    readCollectionFiles                     html  
    readRegionGRL                           html  
    readRegionSetAnnotation                 html  
    redefineUserSets                        html  
    replaceFileExtension                    html  
    runLOLA                                 html  
    sampleGRL                               html  
    setLapplyAlias                          html  
    setSharedDataDir                        html  
    splitDataTable                          html  
    splitFileIntoCollection                 html  
    userSets                                html  
    userUniverse                            html  
    write.tsv                               html  
    writeCombinedEnrichment                 html  
    writeDataTableSplitByColumn             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'LOLA' as LOLA_1.25.1.zip
* DONE (LOLA)