Multiple platform build/check report for BioC 3.15 - INSTALL results for GeomxTools on riesling1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 20.04.4 LTS)	x86_64	R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences"	4334
riesling1	Windows Server 2019 Standard	x64	R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences"	4097
palomino3	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences"	4083
merida1	macOS 10.14.6 Mojave	x86_64	R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences"	4134
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

To the developers/maintainers of the GeomxTools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeomxTools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GeomxTools
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'GeomxTools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GeomxTools'
    finding HTML links ... done
    NanoStringGeoMxSet-class                html  
    finding level-2 HTML links ... done

    aggregateCounts                         html  
    checkQCFlags-NanoStringGeoMxSet-method
                                            html  
    checkQCFlags                            html  
    countsShiftedByOne                      html  
    logtBase                                html  
    mixedModelDE                            html  
    ngeoMean                                html  
    ngeoSD                                  html  
    normalize-NanoStringGeoMxSet-method     html  
    readDccFile                             html  
    readNanoStringGeoMxSet                  html  
    readPKCFile                             html  
    setBackgroundQCFlags                    html  
    setBioProbeQCFlags                      html  
    setGeoMxQCFlags                         html  
    setQCFlags-NanoStringGeoMxSet-method    html  
    setSegmentQCFlags                       html  
    setSeqQCFlags                           html  
    shiftCountsOne                          html  
    summarizeNegatives                      html  
    writeNanoStringGeoMxSet                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeomxTools)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'DEsubs' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'zinbwave' is missing or broken
 done

INSTALL results for GeomxTools on riesling1

Summary

Command output