Back to Multiple platform build/check report for BioC 3.15
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-03-18 11:07:32 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for FoldGO on riesling1


To the developers/maintainers of the FoldGO package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/FoldGO.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 684/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FoldGO 1.13.0  (landing page)
Daniil Wiebe
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/FoldGO
git_branch: master
git_last_commit: e366cbe
git_last_commit_date: 2021-10-26 12:46:48 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'topGO' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: FoldGO
Version: 1.13.0
Command: rm -rf FoldGO.buildbin-libdir && mkdir FoldGO.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=FoldGO.buildbin-libdir FoldGO_1.13.0.tar.gz
StartedAt: 2022-03-17 21:09:00 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:10:28 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 88.5 seconds
RetCode: 0
Status:   OK  
PackageFile: FoldGO_1.13.0.zip
PackageFileSize: 1.271 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf FoldGO.buildbin-libdir && mkdir FoldGO.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=FoldGO.buildbin-libdir FoldGO_1.13.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'FoldGO' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB

** inst
** byte-compile and prepare package for lazy loading
in method for 'getAnnotation' with signature '"MgsaSets"': no definition for class "MgsaSets"
** help
*** installing help indices
  converting help for package 'FoldGO'
    finding HTML links ... done
    examdata_bg                             html  
    examdata_degs                           html  
    examdata_objs                           html  
    fagroupstopgo_class                     html  
    foldspectest_class                      html  
    gafreader_class                         html  
    genegroups_class                        html  
    getAnnotation                           html  
    getWholeIntName                         html  
    plot-FoldSpecTest-ANY-method            html  
    rna_seq_data                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'FoldGO' as FoldGO_1.13.0.zip
* DONE (FoldGO)