Back to Multiple platform build/check report for BioC 3.15
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-01-14 11:07:27 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4159
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4055
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3997
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4114
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for Doscheda on riesling1


To the developers/maintainers of the Doscheda package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Doscheda.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 537/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Doscheda 1.17.0  (landing page)
Bruno Contrino
Snapshot Date: 2022-01-13 13:55:14 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/Doscheda
git_branch: master
git_last_commit: 373da77
git_last_commit_date: 2021-10-28 09:31:02 -0500 (Thu, 28 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'vsn' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: Doscheda
Version: 1.17.0
Command: rm -rf Doscheda.buildbin-libdir && mkdir Doscheda.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Doscheda.buildbin-libdir Doscheda_1.17.0.tar.gz
StartedAt: 2022-01-13 21:00:28 -0500 (Thu, 13 Jan 2022)
EndedAt: 2022-01-13 21:01:40 -0500 (Thu, 13 Jan 2022)
EllapsedTime: 72.4 seconds
RetCode: 0
Status:   OK  
PackageFile: Doscheda_1.17.0.zip
PackageFileSize: 3.995 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf Doscheda.buildbin-libdir && mkdir Doscheda.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Doscheda.buildbin-libdir Doscheda_1.17.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'Doscheda' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
in method for 'getInput' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'getNorm' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'getFinal' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'getParameters' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'getDatasets' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'boxplot' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'corrPlot' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
in method for 'densityPlot' with signature '"ChemoProtSet"': no definition for class "ChemoProtSet"
Creating a new generic function for 'meanSdPlot' in package 'Doscheda'
** help
*** installing help indices
  converting help for package 'Doscheda'
    finding HTML links ... done
    ChemoProtSet-class                      html  
    boxplot-ChemoProtSet-method             html  
    corrPlot-methods                        html  
    densityPlot-methods                     html  
    doscheda                                html  
    doschedaApp                             html  
    doschedaData                            html  
    fitModel-methods                        html  
    getDatasets-methods                     html  
    getFinal-methods                        html  
    getInput-methods                        html  
    getNorm-methods                         html  
    getParameters-methods                   html  
    makeReport                              html  
    meanSdPlot-methods                      html  
    pcaPlot-methods                         html  
    plot.ChemoProtSet                       html  
    processedExample                        html  
    removePeptides-methods                  html  
    replicatePlot-methods                   html  
    runDoscheda                             html  
    runNormalisation-methods                html  
    setData-methods                         html  
    setParameters-methods                   html  
    volcanoPlot-methods                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Doscheda' as Doscheda_1.17.0.zip
* DONE (Doscheda)