Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:07:16 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for COTAN on riesling1


To the developers/maintainers of the COTAN package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/COTAN.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 410/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
COTAN 0.99.10  (landing page)
Galfrè Silvia Giulia
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/COTAN
git_branch: master
git_last_commit: 27234e7
git_last_commit_date: 2021-12-26 04:55:08 -0400 (Sun, 26 Dec 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: COTAN
Version: 0.99.10
Command: rm -rf COTAN.buildbin-libdir && mkdir COTAN.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=COTAN.buildbin-libdir COTAN_0.99.10.tar.gz
StartedAt: 2022-03-17 21:02:33 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:03:37 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 64.1 seconds
RetCode: 0
Status:   OK  
PackageFile: COTAN_0.99.10.zip
PackageFileSize: 2.705 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf COTAN.buildbin-libdir && mkdir COTAN.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=COTAN.buildbin-libdir COTAN_0.99.10.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'COTAN' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'COTAN'
    finding HTML links ... done
    ERCC.cotan                              html  
    ERCCraw                                 html  
    add.row.to.meta                         html  
    automatic.COTAN.object.creation         html  
    clean                                   html  
    cotan_analysis                          html  
    drop.genes.cells                        html  
    fun_linear                              html  
    get.GDI                                 html  
    get.a                                   html  
    get.cell.number                         html  
    get.cell.size                           html  
    get.coex                                html  
    get.constitutive.genes                  html  
    get.expected.ct                         html  
    get.gene.coexpression.space             html  
    get.genes                               html  
    get.lambda                              html  
    get.metadata                            html  
    get.normdata                            html  
    get.nu                                  html  
    get.observed.ct                         html  
    get.pval                                html  
    get.rawdata                             html  
    initRaw                                 html  
    plot_GDI                                html  
    plot_general.heatmap                    html  
    plot_heatmap                            html  
    raw.dataset                             html  
    scCOTAN-class                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'COTAN' as COTAN_0.99.10.zip
* DONE (COTAN)