Alan O'Callaghan
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/scater |
| git_branch: RELEASE_3_14 |
| git_last_commit: ea2c95c |
| git_last_commit_date: 2021-10-26 12:25:30 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:18 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the scater package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scater.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1710/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| scater 1.22.0 (landing page) Alan O'Callaghan
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: scater |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/scater_1.22.0.tar.gz && rm -rf scater.buildbin-libdir && mkdir scater.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scater.buildbin-libdir scater_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL scater_1.22.0.zip && rm scater_1.22.0.tar.gz scater_1.22.0.zip |
| StartedAt: 2022-04-12 05:54:17 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:56:28 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 130.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/scater_1.22.0.tar.gz && rm -rf scater.buildbin-libdir && mkdir scater.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scater.buildbin-libdir scater_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL scater_1.22.0.zip && rm scater_1.22.0.tar.gz scater_1.22.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
17 1065k 17 181k 0 0 403k 0 0:00:02 --:--:-- 0:00:02 403k
100 1065k 100 1065k 0 0 785k 0 0:00:01 0:00:01 --:--:-- 785k
install for i386
* installing *source* package 'scater' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'scater'
finding HTML links ... done
SCESet html
accessors html
finding level-2 HTML links ... done
annotateBMFeatures html
bootstraps html
defunct html
getExplanatoryPCs html
getVarianceExplained html
ggsce html
multiplot html
nexprs html
plotColData html
plotDots html
plotExplanatoryPCs html
plotExplanatoryVariables html
plotExpression html
plotGroupedHeatmap html
plotHeatmap html
plotHighestExprs html
plotPlatePosition html
plotRLE html
plotReducedDim html
plotRowData html
plotScater html
plot_reddim html
reexports html
retrieveCellInfo html
retrieveFeatureInfo html
runColDataPCA html
runDiffusionMap html
runMDS html
runMultiUMAP html
runNMF html
runPCA html
runTSNE html
runUMAP html
scater-pkg html
scater-plot-args html
toSingleCellExperiment html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'scater' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scater' as scater_1.22.0.zip
* DONE (scater)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'scater' successfully unpacked and MD5 sums checked