Bernat Gel
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/karyoploteR |
| git_branch: RELEASE_3_14 |
| git_last_commit: 1a34c68 |
| git_last_commit_date: 2022-01-19 05:36:06 -0400 (Wed, 19 Jan 2022) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:46 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the karyoploteR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/karyoploteR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 975/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| karyoploteR 1.20.3 (landing page) Bernat Gel
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: karyoploteR |
| Version: 1.20.3 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/karyoploteR_1.20.3.tar.gz && rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.20.3.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL karyoploteR_1.20.3.zip && rm karyoploteR_1.20.3.tar.gz karyoploteR_1.20.3.zip |
| StartedAt: 2022-04-12 07:11:39 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:13:58 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 139.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/karyoploteR_1.20.3.tar.gz && rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.20.3.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL karyoploteR_1.20.3.zip && rm karyoploteR_1.20.3.tar.gz karyoploteR_1.20.3.zip
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install for i386
* installing *source* package 'karyoploteR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'karyoploteR'
finding HTML links ... done
addGeneNames html
autotrack html
colByCategory html
colByChr html
colByRegion html
colByValue html
darker html
filterParams html
findIntersections html
getChromosomeNamesBoundingBox html
getColorSchemas html
getCytobandColors html
getCytobands html
finding level-2 HTML links ... done
getDataPanelBoundingBox html
getDefaultPlotParams html
getMainTitleBoundingBox html
getTextSize html
getVariantsColors html
horizonColors html
is.color html
kpAbline html
kpAddBaseNumbers html
kpAddChromosomeNames html
kpAddChromosomeSeparators html
kpAddColorRect html
kpAddCytobandLabels html
kpAddCytobands html
kpAddCytobandsAsLine html
kpAddLabels html
kpAddMainTitle html
kpArea html
kpArrows html
kpAxis html
kpBars html
kpDataBackground html
kpHeatmap html
kpLines html
kpPlotBAMCoverage html
kpPlotBAMDensity html
kpPlotBigWig html
kpPlotCoverage html
kpPlotDensity html
kpPlotGenes html
kpPlotHorizon html
kpPlotLinks html
kpPlotLoess html
kpPlotManhattan html
kpPlotMarkers html
kpPlotNames html
kpPlotRainfall html
kpPlotRegions html
kpPlotRibbon html
kpPlotTranscripts html
kpPoints html
kpPolygon html
kpRect html
kpSegments html
kpText html
lighter html
makeGenesDataFromTxDb html
mergeTranscripts html
plotDefaultPlotParams html
plotKaryotype html
plotPalettes html
prepareParameters2 html
prepareParameters4 html
processClipping html
transparent html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'karyoploteR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'karyoploteR' as karyoploteR_1.20.3.zip
* DONE (karyoploteR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'karyoploteR' successfully unpacked and MD5 sums checked