Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:36 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the geneRxCluster package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/geneRxCluster.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 733/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
geneRxCluster 1.30.0 (landing page) Charles Berry
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: geneRxCluster |
Version: 1.30.0 |
Command: rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.30.0.tar.gz |
StartedAt: 2022-04-13 06:17:45 -0400 (Wed, 13 Apr 2022) |
EndedAt: 2022-04-13 06:18:30 -0400 (Wed, 13 Apr 2022) |
EllapsedTime: 44.6 seconds |
RetCode: 0 |
Status: OK |
PackageFile: geneRxCluster_1.30.0.zip |
PackageFileSize: 277.1 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.30.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'geneRxCluster' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c cluster.c -o cluster.o cluster.c: In function 'cutptClean_new_elt': cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else] if (*pvj!=NOTAIL) ^ cluster.c: In function 'gRxC_cluster': cluster.c:682:2: warning: 'cutptFunRes' may be used uninitialized in this function [-Wmaybe-uninitialized] SET_VECTOR_ELT(final,2,cutptFunRes); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o geneRxCluster.dll tmp.def cluster.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/geneRxCluster.buildbin-libdir/00LOCK-geneRxCluster/00new/geneRxCluster/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'geneRxCluster' finding HTML links ... done critVal.alpha html critVal.power html critVal.target html gRxCluster-object html finding level-2 HTML links ... done gRxCluster html gRxPlot html gRxPlotClumps html gRxSummary html geneRxCluster html noprune html plot.cutpoints html prune.loglik html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'geneRxCluster' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c cluster.c -o cluster.o cluster.c: In function 'cutptClean_new_elt': cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else] if (*pvj!=NOTAIL) ^ cluster.c: In function 'gRxC_cluster': cluster.c:682:2: warning: 'cutptFunRes' may be used uninitialized in this function [-Wmaybe-uninitialized] SET_VECTOR_ELT(final,2,cutptFunRes); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o geneRxCluster.dll tmp.def cluster.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/geneRxCluster.buildbin-libdir/geneRxCluster/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'geneRxCluster' as geneRxCluster_1.30.0.zip * DONE (geneRxCluster)