Andreas Mitterecker
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/fabia |
| git_branch: RELEASE_3_14 |
| git_last_commit: e5cd3a4 |
| git_last_commit_date: 2021-10-26 11:56:21 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:32 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the fabia package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/fabia.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 620/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| fabia 2.40.0 (landing page) Andreas Mitterecker
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: fabia |
| Version: 2.40.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/fabia_2.40.0.tar.gz && rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fabia.buildbin-libdir fabia_2.40.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL fabia_2.40.0.zip && rm fabia_2.40.0.tar.gz fabia_2.40.0.zip |
| StartedAt: 2022-04-12 04:28:15 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:30:26 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 131.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/fabia_2.40.0.tar.gz && rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fabia.buildbin-libdir fabia_2.40.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL fabia_2.40.0.zip && rm fabia_2.40.0.tar.gz fabia_2.40.0.zip
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install for i386
* installing *source* package 'fabia' ...
** using staged installation
** libs
running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
"C:/rtools40/mingw32/bin/"gcc -c fabiac.c -o fabia.o -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -Wall -O3
"C:/rtools40/mingw32/bin/"gcc -shared -s -static-libgcc fabia.o -L"C:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386" -lR -o fabia.dll
rm -f fabia.o *.a *.o *.so
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/libs/i386
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'fabia'
finding HTML links ... done
Factorization-class html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/help/L.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/help/L+2CFactorization-method.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/fabia.buildbin-libdir/00LOCK-fabia/00new/fabia/help/L+3C-.html
estimateMode html
extractBic html
extractPlot html
fabi html
fabia html
fabiaDemo html
fabiaVersion html
fabiap html
fabias html
fabiasp html
makeFabiaData html
makeFabiaDataBlocks html
makeFabiaDataBlocksPos html
makeFabiaDataPos html
matrixImagePlot html
mfsc html
nmfdiv html
nmfeu html
nmfsc html
plotBicluster html
projFunc html
projFuncPos html
readSamplesSpfabia html
readSpfabiaResult html
samplesPerFeature html
spfabia html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'fabia' ...
** libs
running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
"C:/rtools40/mingw64/bin/"gcc -c fabiac.c -o fabia.o -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -Wall -O3
"C:/rtools40/mingw64/bin/"gcc -shared -s -static-libgcc fabia.o -L"C:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64" -lR -o fabia.dll
rm -f fabia.o *.a *.o *.so
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/fabia.buildbin-libdir/fabia/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fabia' as fabia_2.40.0.zip
* DONE (fabia)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'fabia' successfully unpacked and MD5 sums checked