| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:08 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the affycoretools package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/affycoretools.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 27/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| affycoretools 1.66.0 (landing page) James W. MacDonald
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: affycoretools |
| Version: 1.66.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/affycoretools_1.66.0.tar.gz && rm -rf affycoretools.buildbin-libdir && mkdir affycoretools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=affycoretools.buildbin-libdir affycoretools_1.66.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL affycoretools_1.66.0.zip && rm affycoretools_1.66.0.tar.gz affycoretools_1.66.0.zip |
| StartedAt: 2022-04-12 07:17:02 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:18:59 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 117.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/affycoretools_1.66.0.tar.gz && rm -rf affycoretools.buildbin-libdir && mkdir affycoretools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=affycoretools.buildbin-libdir affycoretools_1.66.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL affycoretools_1.66.0.zip && rm affycoretools_1.66.0.tar.gz affycoretools_1.66.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
11 6444k 11 727k 0 0 1023k 0 0:00:06 --:--:-- 0:00:06 1023k
39 6444k 39 2544k 0 0 1496k 0 0:00:04 0:00:01 0:00:03 1496k
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100 6444k 100 6444k 0 0 2147k 0 0:00:03 0:00:03 --:--:-- 2147k
install for i386
* installing *source* package 'affycoretools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'affycoretools'
finding HTML links ... done
affycoretools-defunct html
affycoretools html
affystart html
annotateEset html
dataAndHeatmapPage html
doGlimma html
entrezLinks html
fixHeaderAndGo html
geneSetPage html
finding level-2 HTML links ... done
getCols html
getMainProbes html
gsHeatmap html
intNames html
make.cl html
makeGoGeneTable html
makeGoTable html
makeHmap html
makeImages html
makeIndices html
makeVenn html
maplot html
mirna2mrna html
outputRomer html
pca.legend html
plotDeg html
plotPCA html
runRomer html
tableFilt html
venn4Way html
vennCounts2 html
vennInLine html
vennPage html
vennSelect2 html
writeFit html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'affycoretools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'affycoretools' as affycoretools_1.66.0.zip
* DONE (affycoretools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'affycoretools' successfully unpacked and MD5 sums checked