| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:03 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the PathoStat package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PathoStat.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1377/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| PathoStat 1.20.0 (landing page) Solaiappan Manimaran
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: PathoStat |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/PathoStat_1.20.0.tar.gz && rm -rf PathoStat.buildbin-libdir && mkdir PathoStat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PathoStat.buildbin-libdir PathoStat_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL PathoStat_1.20.0.zip && rm PathoStat_1.20.0.tar.gz PathoStat_1.20.0.zip |
| StartedAt: 2022-04-12 06:56:39 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:58:52 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 133.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/PathoStat_1.20.0.tar.gz && rm -rf PathoStat.buildbin-libdir && mkdir PathoStat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PathoStat.buildbin-libdir PathoStat_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL PathoStat_1.20.0.zip && rm PathoStat_1.20.0.tar.gz PathoStat_1.20.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 951k 100 951k 0 0 932k 0 0:00:01 0:00:01 --:--:-- 933k
100 951k 100 951k 0 0 932k 0 0:00:01 0:00:01 --:--:-- 932k
install for i386
* installing *source* package 'PathoStat' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'PathoStat'
finding HTML links ... done
Bootstrap_LOOCV_LR_AUC html
Chisq_Test_Pam html
Fisher_Test_Pam html
GET_PAM html
LOOAUC_simple_multiple_noplot_one_df html
LOOAUC_simple_multiple_one_df html
PathoStat-class html
TranslateIdToTaxLevel html
Wilcox_Test_df html
findRAfromCount html
findTaxonMat html
findTaxonomy html
findTaxonomy300 html
formatTaxTable html
getShinyInput html
getShinyInputCombat html
getShinyInputOrig html
getSignatureFromMultipleGlmnet html
grepTid html
loadPathoscopeReports html
loadPstat html
log2CPM html
percent html
phyloseq_to_edgeR html
plotPCAPlotly html
plotPCoAPlotly html
pstat_data html
readPathoscopeData html
runPathoStat html
savePstat html
setShinyInput html
setShinyInputCombat html
setShinyInputOrig html
summarizeTable html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'PathoStat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PathoStat' as PathoStat_1.20.0.zip
* DONE (PathoStat)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'PathoStat' successfully unpacked and MD5 sums checked