Multiple platform build/check report for BioC 3.14 - BUILD BIN results for GmicR on tokay2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4324
tokay2	Windows Server 2012 R2 Standard	x64	4.1.3 (2022-03-10) -- "One Push-Up"	4077
machv2	macOS 10.14.6 Mojave	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4137
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

To the developers/maintainers of the GmicR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GmicR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

Summary

Package: GmicR

Version: 1.8.0

Command: rm -rf GmicR.buildbin-libdir && mkdir GmicR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GmicR.buildbin-libdir GmicR_1.8.0.tar.gz

StartedAt: 2022-04-13 06:20:51 -0400 (Wed, 13 Apr 2022)

EndedAt: 2022-04-13 06:21:35 -0400 (Wed, 13 Apr 2022)

EllapsedTime: 44.2 seconds

RetCode: 0

Status: OK

PackageFile: GmicR_1.8.0.zip

PackageFileSize: 3.467 MiB

Command output

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### Running command:
###
###   rm -rf GmicR.buildbin-libdir && mkdir GmicR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GmicR.buildbin-libdir GmicR_1.8.0.tar.gz
###
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install for i386

* installing *source* package 'GmicR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
** help
*** installing help indices
  converting help for package 'GmicR'
    finding HTML links ... done
    Auto_WGCNA                              html  
    Batch_Net                               html  
    Data_Prep                               html  
    GO_Module_NameR                         html  
    GSEAGO_Builder                          html  
    Gmic_viz                                html  
    InverseARCs                             html  
    Query_Prep                              html  
    bn_tabu_gen                             html  
    xCell_loader                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GmicR' ...
not using staged install with --libs-only
** testing if installed package can be loaded
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
* MD5 sums
packaged installation of 'GmicR' as GmicR_1.8.0.zip
* DONE (GmicR)