Andrea Gobbi
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/BiRewire |
| git_branch: RELEASE_3_14 |
| git_last_commit: c35677f |
| git_last_commit_date: 2022-04-04 04:41:41 -0400 (Mon, 04 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:15 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the BiRewire package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiRewire.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 197/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BiRewire 3.26.5 (landing page) Andrea Gobbi
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: BiRewire |
| Version: 3.26.5 |
| Command: rm -rf BiRewire.buildbin-libdir && mkdir BiRewire.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiRewire.buildbin-libdir BiRewire_3.26.5.tar.gz |
| StartedAt: 2022-04-13 05:43:45 -0400 (Wed, 13 Apr 2022) |
| EndedAt: 2022-04-13 05:44:13 -0400 (Wed, 13 Apr 2022) |
| EllapsedTime: 28.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BiRewire_3.26.5.zip |
| PackageFileSize: 729.7 KiB |
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### Running command:
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### rm -rf BiRewire.buildbin-libdir && mkdir BiRewire.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiRewire.buildbin-libdir BiRewire_3.26.5.tar.gz
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install for i386
* installing *source* package 'BiRewire' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BiRewire.c -o BiRewire.o
BiRewire.c: In function 'rewire_sparse':
BiRewire.c:1066:16: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
if( a!=c && b!=d & a!=d && c!=b && (( ad==1 && cb==1 )|| (ac==1 && bd==1) )) {
~^~~
BiRewire.c: In function 'rewire_sparse_ex':
BiRewire.c:1149:16: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
if( a!=c && b!=d & a!=d && c!=b && (( ad==1 && cb==1 )|| (ac==1 && bd==1) )) {
~^~~
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c interface.c -o interface.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o BiRewire.dll tmp.def BiRewire.o interface.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/BiRewire.buildbin-libdir/00LOCK-BiRewire/00new/BiRewire/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BiRewire'
finding HTML links ... done
BRCA_binary_matrix html
BiRewire-package html
birewire.analysis.bipartite html
finding level-2 HTML links ... done
birewire.analysis.dsg html
birewire.analysis.undirected html
birewire.bipartite.from.incidence html
birewire.build.dsg html
birewire.induced.bipartite html
birewire.load.dsg html
birewire.rewire.bipartite html
birewire.rewire.bipartite.and.projections
html
birewire.rewire.dsg html
birewire.rewire.undirected html
birewire.sampler.bipartite html
birewire.sampler.dsg html
birewire.sampler.undirected html
birewire.similarity html
birewire.similarity.dsg html
birewire.slum.to.sparseMatrix html
birewire.visual.monitoring.bipartite html
birewire.visual.monitoring.dsg html
birewire.visual.monitoring.undirected html
test_dsg html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BiRewire' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BiRewire.c -o BiRewire.o
BiRewire.c: In function 'rewire_sparse':
BiRewire.c:1066:16: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
if( a!=c && b!=d & a!=d && c!=b && (( ad==1 && cb==1 )|| (ac==1 && bd==1) )) {
~^~~
BiRewire.c: In function 'rewire_sparse_ex':
BiRewire.c:1149:16: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
if( a!=c && b!=d & a!=d && c!=b && (( ad==1 && cb==1 )|| (ac==1 && bd==1) )) {
~^~~
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c interface.c -o interface.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o BiRewire.dll tmp.def BiRewire.o interface.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/BiRewire.buildbin-libdir/BiRewire/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiRewire' as BiRewire_3.26.5.zip
* DONE (BiRewire)