| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:09 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the AnnotationDbi package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnnotationDbi.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 60/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| AnnotationDbi 1.56.2 (landing page) Bioconductor Package Maintainer
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: AnnotationDbi |
| Version: 1.56.2 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AnnotationDbi_1.56.2.tar.gz && rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationDbi.buildbin-libdir AnnotationDbi_1.56.2.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.56.2.zip && rm AnnotationDbi_1.56.2.tar.gz AnnotationDbi_1.56.2.zip |
| StartedAt: 2022-04-12 04:55:06 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:02:01 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 415.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AnnotationDbi_1.56.2.tar.gz && rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationDbi.buildbin-libdir AnnotationDbi_1.56.2.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.56.2.zip && rm AnnotationDbi_1.56.2.tar.gz AnnotationDbi_1.56.2.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
5 3850k 5 205k 0 0 420k 0 0:00:09 --:--:-- 0:00:09 421k
32 3850k 32 1269k 0 0 852k 0 0:00:04 0:00:01 0:00:03 851k
81 3850k 81 3121k 0 0 1257k 0 0:00:03 0:00:02 0:00:01 1257k
100 3850k 100 3850k 0 0 1402k 0 0:00:02 0:00:02 --:--:-- 1402k
install for i386
* installing *source* package 'AnnotationDbi' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'packageName' in package 'AnnotationDbi'
Creating a generic function for 'ls' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'eapply' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'exists' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'sample' from package 'base' in package 'AnnotationDbi'
** help
*** installing help indices
converting help for package 'AnnotationDbi'
finding HTML links ... done
AnnDbObj-class html
AnnDbPkg-checker html
AnnotationDb-class html
AnnotationDbi-internals html
Bimap-direction html
Bimap-envirAPI html
Bimap-keys html
Bimap-toTable html
Bimap html
BimapFiltering html
BimapFormatting html
GOColsAndKeytypes html
GOFrame html
GOTerms-class html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/AnnotationDbi.buildbin-libdir/00LOCK-AnnotationDbi/00new/AnnotationDbi/help/Term.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/AnnotationDbi.buildbin-libdir/00LOCK-AnnotationDbi/00new/AnnotationDbi/help/Ontology.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/AnnotationDbi.buildbin-libdir/00LOCK-AnnotationDbi/00new/AnnotationDbi/help/Definition.html
KEGGFrame html
colsAndKeytypes html
createSimpleBimap html
inpIDMapper html
makeGOGraph html
make_eg_to_go_map html
orgPackageName html
organismKEGGFrame html
print.probetable html
toSQLStringSet html
unlist2 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'AnnotationDbi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationDbi' as AnnotationDbi_1.56.2.zip
* DONE (AnnotationDbi)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'AnnotationDbi' successfully unpacked and MD5 sums checked