Davide Risso
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/zinbwave |
| git_branch: RELEASE_3_13 |
| git_last_commit: a2db5c9 |
| git_last_commit_date: 2021-09-14 05:49:37 -0400 (Tue, 14 Sep 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:27 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the zinbwave package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/zinbwave.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 2040/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| zinbwave 1.14.2 (landing page) Davide Risso
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: zinbwave |
| Version: 1.14.2 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/zinbwave_1.14.2.tar.gz && rm -rf zinbwave.buildbin-libdir && mkdir zinbwave.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=zinbwave.buildbin-libdir zinbwave_1.14.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL zinbwave_1.14.2.zip && rm zinbwave_1.14.2.tar.gz zinbwave_1.14.2.zip |
| StartedAt: 2021-10-14 09:20:41 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:21:36 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 54.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/zinbwave_1.14.2.tar.gz && rm -rf zinbwave.buildbin-libdir && mkdir zinbwave.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=zinbwave.buildbin-libdir zinbwave_1.14.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL zinbwave_1.14.2.zip && rm zinbwave_1.14.2.tar.gz zinbwave_1.14.2.zip
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install for i386
* installing *source* package 'zinbwave' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'zinbwave'
finding HTML links ... done
ZinbModel-class html
computeDevianceResiduals html
computeObservationalWeights html
getAlpha_mu html
getAlpha_pi html
getBeta_mu html
getBeta_pi html
getEpsilon_W html
getEpsilon_alpha html
getEpsilon_beta_mu html
getEpsilon_beta_pi html
getEpsilon_gamma_mu html
getEpsilon_gamma_pi html
getEpsilon_zeta html
getGamma_mu html
getGamma_pi html
getLogMu html
getLogitPi html
getMu html
getPhi html
getPi html
getTheta html
getV_mu html
getV_pi html
getW html
getX_mu html
getX_pi html
getZeta html
glmWeightedF html
imputeZeros html
independentFiltering html
loglik html
nFactors html
nFeatures html
nParams html
nSamples html
orthogonalizeTraceNorm html
penalty html
pvalueAdjustment html
solveRidgeRegression html
toydata html
zinb.loglik html
zinb.loglik.dispersion html
zinb.loglik.dispersion.gradient html
zinb.loglik.matrix html
zinb.loglik.regression html
zinb.loglik.regression.gradient html
zinb.regression.parseModel html
zinbAIC html
zinbFit html
zinbInitialize html
zinbModel html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/zinbwave.buildbin-libdir/00LOCK-zinbwave/00new/zinbwave/help/zinbModel.html
zinbOptimize html
zinbOptimizeDispersion html
zinbSim html
zinbsurf html
zinbwave html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'zinbwave' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'zinbwave' as zinbwave_1.14.2.zip
* DONE (zinbwave)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'zinbwave' successfully unpacked and MD5 sums checked