Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:22 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the sesame package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sesame.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1745/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
sesame 1.10.5 (landing page) Wanding Zhou
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: sesame |
Version: 1.10.5 |
Command: rm -rf sesame.buildbin-libdir && mkdir sesame.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sesame.buildbin-libdir sesame_1.10.5.tar.gz |
StartedAt: 2021-10-15 11:46:18 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 11:47:49 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 91.2 seconds |
RetCode: 0 |
Status: OK |
PackageFile: sesame_1.10.5.zip |
PackageFileSize: 16.27 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf sesame.buildbin-libdir && mkdir sesame.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sesame.buildbin-libdir sesame_1.10.5.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'sesame' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'sesame' finding HTML links ... done BetaValueToMValue html DML html DMLShrinkage html DMR html IG-methods html IG-replace-methods html IGpass html II-methods html II-replace-methods html IIpass html IR-methods html IR-replace-methods html IRpass html MValueToBetaValue html RGChannelSetToSigSets html SNPcheck html SigSet-class html SigSetList-class html SigSetList-methods html SigSetList html SigSetListFromIDATs html SigSetListFromPath html SigSetToRatioSet html SigSetsToRGChannelSet html addMask html as.data.frame.sesameQC html bSubComplete html bSubMostVariable html bSubProbes html betaToAF html binSignals html bisConversionControl html buildControlMatrix450k html checkLevels html chipAddressToSignal html cnSegmentation html compareMouseBloodReference html compareMouseTissueReference html createUCSCtrack html ctl-methods html ctl-replace-methods html deidentify html detectionPfixedNorm html detectionPnegEcdf html detectionPnegNorm html detectionPnegNormGS html detectionPnegNormTotal html detectionPoobEcdf html detectionPoobEcdf2 html diffRefSet html dyeBiasCorr html dyeBiasCorrMostBalanced html dyeBiasCorrTypeINorm html estimateCellComposition html estimateLeukocyte html extra-methods html extra-replace-methods html extractDesign html formatVCF html getAFTypeIbySumAlleles html getAutosomeProbes html getBetas html getBinCoordinates html getNormCtls html getProbesByChromosome html getProbesByGene html getProbesByRegion html getProbesByTSS html getRefSet html getSexInfo html inferEthnicity html inferSex html inferSexKaryotypes html inferStrain html inferTypeIChannel html initFileSet html isUniqProbeID html makeExampleSeSAMeDataSet html makeExampleTinyEPICDataSet html mapFileSet html mask html meanIntensity html noob html noobsb html oobG-methods html oobG-replace-methods html oobGpass html oobR-methods html oobR-replace-methods html oobRpass html openSesame html openSesameToFile html parseGEOSignalABFile html predictAgeHorvath353 html predictAgePheno html predictAgeSkinBlood html predictMouseAgeInMonth html print.DMLSummary html print.fileSet html print.sesameQC html probeID_designType html probeNames-methods html pval-methods html pval-replace-methods html qualityMask html qualityRank html reIdentify html readFileSet html readIDATpair html reopenSesame html resetMask html restoreMask html saveMask html scrub html scrubSoft html searchIDATprefixes html segmentBins html sesame-package html sesamePlotIntensVsBetas html sesamePlotRedGrnQQ html sesameQC html sesamize html setMask html show-methods html signalMU html sliceFileSet html subsetSignal html summaryExtractCfList html summaryExtractTest html topSegments html totalIntensities html totalIntensityZscore html twoCompsEst2 html visualizeGene html visualizeProbes html visualizeRegion html visualizeSegments html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'sesame' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'sesame' as sesame_1.10.5.zip * DONE (sesame)