Joseph R Boyd
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/seqsetvis |
| git_branch: RELEASE_3_13 |
| git_last_commit: f9979c2 |
| git_last_commit_date: 2021-05-19 12:34:35 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:22 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the seqsetvis package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/seqsetvis.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1741/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| seqsetvis 1.12.0 (landing page) Joseph R Boyd
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: seqsetvis |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/seqsetvis_1.12.0.tar.gz && rm -rf seqsetvis.buildbin-libdir && mkdir seqsetvis.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqsetvis.buildbin-libdir seqsetvis_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL seqsetvis_1.12.0.zip && rm seqsetvis_1.12.0.tar.gz seqsetvis_1.12.0.zip |
| StartedAt: 2021-10-14 11:00:43 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 11:02:11 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 87.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/seqsetvis_1.12.0.tar.gz && rm -rf seqsetvis.buildbin-libdir && mkdir seqsetvis.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqsetvis.buildbin-libdir seqsetvis_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL seqsetvis_1.12.0.zip && rm seqsetvis_1.12.0.tar.gz seqsetvis_1.12.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2 543k 2 14877 0 0 113k 0 0:00:04 --:--:-- 0:00:04 112k
100 543k 100 543k 0 0 1282k 0 --:--:-- --:--:-- --:--:-- 1284k
install for i386
* installing *source* package 'seqsetvis' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'seqsetvis'
finding HTML links ... done
Bcell_peaks html
CTCF_in_10a_bigWig_urls html
CTCF_in_10a_data html
CTCF_in_10a_narrowPeak_grs html
CTCF_in_10a_narrowPeak_urls html
CTCF_in_10a_overlaps_gr html
CTCF_in_10a_profiles_dt html
CTCF_in_10a_profiles_gr html
add_cluster_annotation html
append_ynorm html
applySpline html
assemble_heatmap_cluster_bars html
calc_norm_factors html
centerAtMax html
centerFixedSizeGRanges html
centerGRangesAtMax html
chromHMM_demo_bw_states_gr html
chromHMM_demo_chain_url html
chromHMM_demo_data html
chromHMM_demo_overlaps_gr html
chromHMM_demo_segmentation_url html
chromHMM_demo_state_colors html
chromHMM_demo_state_total_widths html
clusteringKmeans html
clusteringKmeansNestedHclust html
col2hex html
collapse_gr html
convert_collapsed_coord html
crossCorrByRle html
dot-expand_cigar_dt html
dot-expand_cigar_dt_recursive html
dot-rm_dupes html
dot-rm_dupesPE html
easyLoad_bed html
easyLoad_broadPeak html
easyLoad_narrowPeak html
easyLoad_seacr html
expandCigar html
fetchBam html
fragLen_calcStranded html
fragLen_fromMacs2Xls html
getReadLength html
ggellipse html
harmonize_seqlengths html
make_clustering_matrix html
prepare_fetch_GRanges html
prepare_fetch_GRanges_names html
prepare_fetch_GRanges_width html
quantileGRangesWidth html
safeBrew html
seqsetvis-package html
set_list2memb html
shift_anchor html
ssvConsensusIntervalSets html
ssvFactorizeMembTable html
ssvFeatureBars html
ssvFeatureBinaryHeatmap html
ssvFeatureEuler html
ssvFeaturePie html
ssvFeatureUpset html
ssvFeatureVenn html
ssvFetchBam html
ssvFetchBam.single html
ssvFetchBamPE html
ssvFetchBamPE.single html
ssvFetchBigwig html
ssvFetchBigwig.single html
ssvFetchGRanges html
ssvFetchSignal html
ssvMakeMembTable-methods html
ssvOverlapIntervalSets html
ssvSignalBandedQuantiles html
ssvSignalClustering html
ssvSignalHeatmap.ClusterBars html
ssvSignalHeatmap html
ssvSignalLineplot html
ssvSignalLineplotAgg html
ssvSignalScatterplot html
test_peaks html
viewGRangesWinSample_dt html
viewGRangesWinSummary_dt html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'seqsetvis' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'seqsetvis' as seqsetvis_1.12.0.zip
* DONE (seqsetvis)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'seqsetvis' successfully unpacked and MD5 sums checked