Divy Kangeyan
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/scmeth |
| git_branch: RELEASE_3_13 |
| git_last_commit: 1ad2a18 |
| git_last_commit_date: 2021-05-19 12:33:28 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:21 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the scmeth package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scmeth.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1704/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| scmeth 1.12.0 (landing page) Divy Kangeyan
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: scmeth |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/scmeth_1.12.0.tar.gz && rm -rf scmeth.buildbin-libdir && mkdir scmeth.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scmeth.buildbin-libdir scmeth_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL scmeth_1.12.0.zip && rm scmeth_1.12.0.tar.gz scmeth_1.12.0.zip |
| StartedAt: 2021-10-14 11:02:44 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 11:03:45 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 61.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/scmeth_1.12.0.tar.gz && rm -rf scmeth.buildbin-libdir && mkdir scmeth.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scmeth.buildbin-libdir scmeth_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL scmeth_1.12.0.zip && rm scmeth_1.12.0.tar.gz scmeth_1.12.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 733k 100 733k 0 0 1497k 0 --:--:-- --:--:-- --:--:-- 1499k
install for i386
* installing *source* package 'scmeth' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'AnnotationHub::hubUrl' by 'rtracklayer::hubUrl' when loading 'annotatr'
** help
*** installing help indices
converting help for package 'scmeth'
finding HTML links ... done
bsConversionPlot html
chromosomeCoverage html
coverage html
cpgDensity html
cpgDiscretization html
downsample html
featureCoverage html
mbiasplot html
methylationDist html
readmetrics html
repMask html
report html
scmeth html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'AnnotationHub::hubUrl' by 'rtracklayer::hubUrl' when loading 'annotatr'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'AnnotationHub::hubUrl' by 'rtracklayer::hubUrl' when loading 'annotatr'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'scmeth' ...
** testing if installed package can be loaded
Warning: replacing previous import 'AnnotationHub::hubUrl' by 'rtracklayer::hubUrl' when loading 'annotatr'
* MD5 sums
packaged installation of 'scmeth' as scmeth_1.12.0.zip
* DONE (scmeth)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'scmeth' successfully unpacked and MD5 sums checked