Chloe H. Lee
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/proBatch |
| git_branch: RELEASE_3_13 |
| git_last_commit: a577fe3 |
| git_last_commit_date: 2021-05-19 12:42:05 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:16 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the proBatch package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/proBatch.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1434/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| proBatch 1.8.0 (landing page) Chloe H. Lee
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: proBatch |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/proBatch_1.8.0.tar.gz && rm -rf proBatch.buildbin-libdir && mkdir proBatch.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=proBatch.buildbin-libdir proBatch_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL proBatch_1.8.0.zip && rm proBatch_1.8.0.tar.gz proBatch_1.8.0.zip |
| StartedAt: 2021-10-14 09:56:17 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:57:35 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 77.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/proBatch_1.8.0.tar.gz && rm -rf proBatch.buildbin-libdir && mkdir proBatch.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=proBatch.buildbin-libdir proBatch_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL proBatch_1.8.0.zip && rm proBatch_1.8.0.tar.gz proBatch_1.8.0.zip
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install for i386
* installing *source* package 'proBatch' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'proBatch'
finding HTML links ... done
calculate_PVCA html
calculate_feature_CV html
calculate_peptide_corr_distr html
calculate_sample_corr_distr html
check_sample_consistency html
color_list_to_df html
correct_batch_effects html
create_peptide_annotation html
date_to_sample_order html
dates_to_posix html
define_sample_order html
example_peptide_annotation html
example_proteome html
example_proteome_matrix html
example_sample_annotation html
feature_level_diagnostics html
fit_nonlinear html
generate_colors_for_numeric html
long_to_matrix html
matrix_to_long html
merge_rare_levels html
normalize html
plot_CV_distr html
plot_CV_distr.df html
plot_PCA html
plot_PVCA html
plot_PVCA.df html
plot_corr_matrix html
plot_heatmap_diagnostic html
plot_heatmap_generic html
plot_hierarchical_clustering html
plot_peptide_corr_distribution html
plot_protein_corrplot html
plot_sample_corr_distribution html
plot_sample_corr_heatmap html
plot_sample_mean_or_boxplot html
plot_split_violin_with_boxplot html
prepare_PVCA_df html
proBatch html
sample_annotation_to_colors html
transform_raw_data html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'proBatch' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'proBatch' as proBatch_1.8.0.zip
* DONE (proBatch)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'proBatch' successfully unpacked and MD5 sums checked