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This page was generated on 2021-10-15 15:06:15 -0400 (Fri, 15 Oct 2021).

INSTALL results for phantasus on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/phantasus.git to
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raw results

Package 1377/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phantasus 1.12.0  (landing page)
Alexey Sergushichev
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/phantasus
git_branch: RELEASE_3_13
git_last_commit: e2115e2
git_last_commit_date: 2021-05-19 12:34:17 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: phantasus
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/phantasus_1.12.0.tar.gz && rm -rf phantasus.buildbin-libdir && mkdir phantasus.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phantasus.buildbin-libdir phantasus_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL phantasus_1.12.0.zip && rm phantasus_1.12.0.tar.gz phantasus_1.12.0.zip
StartedAt: 2021-10-14 09:45:58 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 09:47:53 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 114.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/phantasus_1.12.0.tar.gz && rm -rf phantasus.buildbin-libdir && mkdir phantasus.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phantasus.buildbin-libdir phantasus_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL phantasus_1.12.0.zip && rm phantasus_1.12.0.tar.gz phantasus_1.12.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1 10.3M    1  156k    0     0   689k      0  0:00:15 --:--:--  0:00:15  690k
 45 10.3M   45 4863k    0     0  3956k      0  0:00:02  0:00:01  0:00:01 3957k
 98 10.3M   98 10.2M    0     0  4702k      0  0:00:02  0:00:02 --:--:-- 4701k
100 10.3M  100 10.3M    0     0  4719k      0  0:00:02  0:00:02 --:--:-- 4720k

install for i386

* installing *source* package 'phantasus' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'phantasus'
    finding HTML links ... done
    adjustDataset                           html  
    annotationDBMeta                        html  
    calcPCA                                 html  
    calculatedAnnotation                    html  
    checkGPLsFallback                       html  
    colMeansByGroups                        html  
    collapseDataset                         html  
    convertByAnnotationDB                   html  
    createES                                html  
    es                                      html  
    fgseaExample                            html  
    generatePreloadedSession                html  
    getArchs4Files                          html  
    getES                                   html  
    getGDS                                  html  
    getGSE                                  html  
    gseaPlot                                html  
    limmaAnalysis                           html  
    loadFromARCHS4                          html  
    loadGEO                                 html  
    loadPreloaded                           html  
    performKmeans                           html  
    queryAnnotationDBMeta                   html  
    read.gct                                html  
    reparseCachedESs                        html  
    reproduceInR                            html  
    servePhantasus                          html  
    shinyGAMAnalysis                        html  
    subsetES                                html  
    write.gct                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'phantasus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'phantasus' as phantasus_1.12.0.zip
* DONE (phantasus)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'phantasus' successfully unpacked and MD5 sums checked