Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:15 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the paxtoolsr package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/paxtoolsr.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1355/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
paxtoolsr 1.26.0 (landing page) Augustin Luna
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
Package: paxtoolsr |
Version: 1.26.0 |
Command: rm -rf paxtoolsr.buildbin-libdir && mkdir paxtoolsr.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=paxtoolsr.buildbin-libdir paxtoolsr_1.26.0.tar.gz |
StartedAt: 2021-10-15 10:53:58 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 10:55:11 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 73.6 seconds |
RetCode: 0 |
Status: OK |
PackageFile: paxtoolsr_1.26.0.zip |
PackageFileSize: 24.81 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf paxtoolsr.buildbin-libdir && mkdir paxtoolsr.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=paxtoolsr.buildbin-libdir paxtoolsr_1.26.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'paxtoolsr' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'paxtoolsr' finding HTML links ... done addAttributeList html convertDataFrameListsToVectors html convertSifToGmt html downloadFile html downloadPc2 html downloadSignedPC html fetch html filterSif html getCacheFiles html getErrorMessage html getNeighbors html getPc html getPcDatabaseNames html getPcUrl html getShortestPathSif html getSifInteractionCategories html graphPc html integrateBiopax html loadSifInIgraph html mapAttributes html mapValues html mergeBiopax html pcDirections html pcFormats html pcGraphQueries html processPcRequest html readBiopax html readGmt html readPcPathwaysInfo html readSbgn html readSif html readSifnx html searchListOfVectors html searchPc html splitSifnxByPathway html summarize html summarizeSif html toCytoscape html toGSEA html toLevel3 html toSBGN html toSif html toSifnx html topPathways html traverse html validate html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'paxtoolsr' as paxtoolsr_1.26.0.zip * DONE (paxtoolsr)