VJ Carey
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/ontoProc |
| git_branch: RELEASE_3_13 |
| git_last_commit: 2ba1033 |
| git_last_commit_date: 2021-05-19 12:31:28 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:14 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the ontoProc package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ontoProc.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1311/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ontoProc 1.14.0 (landing page) VJ Carey
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ontoProc |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ontoProc_1.14.0.tar.gz && rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ontoProc.buildbin-libdir ontoProc_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.14.0.zip && rm ontoProc_1.14.0.tar.gz ontoProc_1.14.0.zip |
| StartedAt: 2021-10-14 08:17:13 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:19:20 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 126.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ontoProc_1.14.0.tar.gz && rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ontoProc.buildbin-libdir ontoProc_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.14.0.zip && rm ontoProc_1.14.0.tar.gz ontoProc_1.14.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
3 40.7M 3 1658k 0 0 1842k 0 0:00:22 --:--:-- 0:00:22 1842k
10 40.7M 10 4544k 0 0 2448k 0 0:00:17 0:00:01 0:00:16 2448k
20 40.7M 20 8512k 0 0 2982k 0 0:00:13 0:00:02 0:00:11 2982k
28 40.7M 28 11.5M 0 0 3059k 0 0:00:13 0:00:03 0:00:10 3059k
28 40.7M 28 11.5M 0 0 2430k 0 0:00:17 0:00:04 0:00:13 2430k
28 40.7M 28 11.6M 0 0 2029k 0 0:00:20 0:00:05 0:00:15 2062k
33 40.7M 33 13.6M 0 0 2044k 0 0:00:20 0:00:06 0:00:14 1894k
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65 40.7M 65 26.6M 0 0 2768k 0 0:00:15 0:00:09 0:00:06 3100k
80 40.7M 80 32.7M 0 0 3089k 0 0:00:13 0:00:10 0:00:03 4335k
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100 40.7M 100 40.7M 0 0 3461k 0 0:00:12 0:00:12 --:--:-- 5743k
install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
restoring symbolic link as a file copy
* installing *source* package 'ontoProc' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ontoProc'
finding HTML links ... done
CLfeats html
PROSYM html
TermSet-class html
allGOterms html
bind_formal_tags html
c-TermSet-method html
cellTypeToGO html
cleanCLOnames html
common_classes html
connect_classes html
ctmarks html
cyclicSigset html
demoApp html
dropStop html
fastGrep html
findCommonAncestors html
finding level-2 HTML links ... done
getCellOnto html
getLeavesFromTerm html
humrna html
improveNodes html
ldfToTerms html
liberalMap html
makeSelectInput html
make_graphNEL_from_ontology_plot html
map2prose html
mapOneNaive html
minicorpus html
nomenCheckup html
onto_plot2 html
onto_roots html
packDesc2019 html
recognizedPredicates html
secLevGen html
selectFromMap html
seur3kTab html
siblings_TAG html
stopWords html
subset_descendants html
sym2CellOnto html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
restoring symbolic link as a file copy
* installing *source* package 'ontoProc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ontoProc' as ontoProc_1.14.0.zip
* DONE (ontoProc)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ontoProc' successfully unpacked and MD5 sums checked