Jessica Larson
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/npGSEA |
| git_branch: RELEASE_3_13 |
| git_last_commit: 7a10483 |
| git_last_commit_date: 2021-05-19 12:04:37 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:14 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the npGSEA package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/npGSEA.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1282/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| npGSEA 1.28.0 (landing page) Jessica Larson
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: npGSEA |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/npGSEA_1.28.0.tar.gz && rm -rf npGSEA.buildbin-libdir && mkdir npGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=npGSEA.buildbin-libdir npGSEA_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL npGSEA_1.28.0.zip && rm npGSEA_1.28.0.tar.gz npGSEA_1.28.0.zip |
| StartedAt: 2021-10-14 09:16:47 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:17:54 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 66.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/npGSEA_1.28.0.tar.gz && rm -rf npGSEA.buildbin-libdir && mkdir npGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=npGSEA.buildbin-libdir npGSEA_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL npGSEA_1.28.0.zip && rm npGSEA_1.28.0.tar.gz npGSEA_1.28.0.zip
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install for i386
* installing *source* package 'npGSEA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA'
** help
*** installing help indices
converting help for package 'npGSEA'
finding HTML links ... done
DF-methods html
alphaValue-methods html
betaHats-methods html
betaStat-methods html
betaValue-methods html
chiSqStat-methods html
geneSetName-methods html
getIncidence html
npGSEA html
npGSEAPlot-methods html
npGSEAResultBeta-class html
npGSEAResultBetaCollection-class html
npGSEAResultChiSq-class html
npGSEAResultChiSqCollection-class html
npGSEAResultNorm-class html
npGSEAResultNormCollection-class html
pLeft-methods html
pRight-methods html
pTwoSided-methods html
pValues-methods html
show-methods html
sigmaSq-methods html
stat-methods html
xSet-methods html
zStat-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA'
** testing if installed package can be loaded from final location
No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'npGSEA' ...
** testing if installed package can be loaded
No methods found in package 'BiocGenerics' for request: 'unlist' when loading 'npGSEA'
* MD5 sums
packaged installation of 'npGSEA' as npGSEA_1.28.0.zip
* DONE (npGSEA)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'npGSEA' successfully unpacked and MD5 sums checked