Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:09 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the karyoploteR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/karyoploteR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 963/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
karyoploteR 1.18.0 (landing page) Bernat Gel
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: karyoploteR |
Version: 1.18.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/karyoploteR_1.18.0.tar.gz && rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL karyoploteR_1.18.0.zip && rm karyoploteR_1.18.0.tar.gz karyoploteR_1.18.0.zip |
StartedAt: 2021-10-14 10:50:32 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 10:51:55 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 83.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/karyoploteR_1.18.0.tar.gz && rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL karyoploteR_1.18.0.zip && rm karyoploteR_1.18.0.tar.gz karyoploteR_1.18.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 49 296k 49 147k 0 0 637k 0 --:--:-- --:--:-- --:--:-- 638k 100 296k 100 296k 0 0 861k 0 --:--:-- --:--:-- --:--:-- 860k install for i386 * installing *source* package 'karyoploteR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'karyoploteR' finding HTML links ... done addGeneNames html autotrack html colByCategory html colByChr html colByRegion html colByValue html darker html filterParams html findIntersections html getChromosomeNamesBoundingBox html getColorSchemas html getCytobandColors html getCytobands html finding level-2 HTML links ... done getDataPanelBoundingBox html getDefaultPlotParams html getMainTitleBoundingBox html getTextSize html getVariantsColors html horizonColors html is.color html kpAbline html kpAddBaseNumbers html kpAddChromosomeNames html kpAddChromosomeSeparators html kpAddColorRect html kpAddCytobandLabels html kpAddCytobands html kpAddCytobandsAsLine html kpAddLabels html kpAddMainTitle html kpArea html kpArrows html kpAxis html kpBars html kpDataBackground html kpHeatmap html kpLines html kpPlotBAMCoverage html kpPlotBAMDensity html kpPlotBigWig html kpPlotCoverage html kpPlotDensity html kpPlotGenes html kpPlotHorizon html kpPlotLinks html kpPlotLoess html kpPlotManhattan html kpPlotMarkers html kpPlotNames html kpPlotRainfall html kpPlotRegions html kpPlotRibbon html kpPlotTranscripts html kpPoints html kpPolygon html kpRect html kpSegments html kpText html lighter html makeGenesDataFromTxDb html mergeTranscripts html plotDefaultPlotParams html plotKaryotype html plotPalettes html prepareParameters2 html prepareParameters4 html processClipping html transparent html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'karyoploteR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'karyoploteR' as karyoploteR_1.18.0.zip * DONE (karyoploteR) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'karyoploteR' successfully unpacked and MD5 sums checked