Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:09 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the isobar package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/isobar.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 948/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
isobar 1.38.0 (landing page) Florian P Breitwieser
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: isobar |
Version: 1.38.0 |
Command: rm -rf isobar.buildbin-libdir && mkdir isobar.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=isobar.buildbin-libdir isobar_1.38.0.tar.gz |
StartedAt: 2021-10-15 09:59:22 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 10:00:48 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 86.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: isobar_1.38.0.zip |
PackageFileSize: 4.14 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf isobar.buildbin-libdir && mkdir isobar.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=isobar.buildbin-libdir isobar_1.38.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'isobar' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for 'coerce' with signature '"MSnSet","IBSpectra"': no definition for class "MSnSet" in method for 'coerce' with signature '"IBSpectra","MSnSet"': no definition for class "MSnSet" Note: possible error in 'png(sprintf("pairwise_correlation_%s.png", ': unused argument (title = "Pairwise Correlation plot") ** help *** installing help indices converting help for package 'isobar' finding HTML links ... done IBSpectra-class html finding level-2 HTML links ... done NoiseModel-class html ProteinGroup-class html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/isobar.buildbin-libdir/00LOCK-isobar/00new/isobar/help/ProteinGroup.html TlsParameter-class html Tlsd-class html calc.delta.score html calc.startpos html calculate-pvalues html calculate.dNSAF html calculate.emPAI html correct.peptide.ratios html distr-methods html fit-distr html getPeptideModifContext html getPhosphoRSProbabilities html getPtmInfo html groupMemberPeptides html human.protein.names html isobar-analysis html isobar-data html isobar-import html isobar-log html isobar-package html isobar-plots html isobar-preprocessing html isobar-reports html maplot.protein html number.ranges html observedKnownSites html peptide.count html proteinInfo-methods html proteinNameAndDescription html ratio-summ html ratiosReshapeWide html reporter.protein-methods html sanitize html shared.ratios html shared.ratios.sign html specificities html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/isobar.buildbin-libdir/00LOCK-isobar/00new/isobar/help/UNSPECIFIC.html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/isobar.buildbin-libdir/00LOCK-isobar/00new/isobar/help/SPECIFICITIES.html spectra.count2 html subsetIBSpectra html utils html writeHscoreData html writeIBSpectra html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'isobar' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'isobar' as isobar_1.38.0.zip * DONE (isobar)