Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:08 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the interacCircos package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/interacCircos.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 928/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
interacCircos 1.2.0 (landing page) Zhe Cui
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: interacCircos |
Version: 1.2.0 |
Command: C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:interacCircos.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings interacCircos_1.2.0.tar.gz |
StartedAt: 2021-10-15 00:45:34 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 00:46:56 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 81.9 seconds |
RetCode: 0 |
Status: OK |
CheckDir: interacCircos.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:interacCircos.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings interacCircos_1.2.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.13-bioc/meat/interacCircos.Rcheck' * using R version 4.1.1 (2021-08-10) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'interacCircos/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'interacCircos' version '1.2.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'interacCircos' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
interacCircos.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/interacCircos_1.2.0.tar.gz && rm -rf interacCircos.buildbin-libdir && mkdir interacCircos.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=interacCircos.buildbin-libdir interacCircos_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL interacCircos_1.2.0.zip && rm interacCircos_1.2.0.tar.gz interacCircos_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 17 394k 17 68637 0 0 130k 0 0:00:03 --:--:-- 0:00:03 130k 100 394k 100 394k 0 0 713k 0 --:--:-- --:--:-- --:--:-- 714k install for i386 * installing *source* package 'interacCircos' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'interacCircos' finding HTML links ... done Circos html CircosArc html CircosAuxLine html CircosBackground html CircosBubble html CircosChord html CircosChord.p html CircosCnv html CircosGene html CircosHeatmap html CircosHistogram html CircosLegend html CircosLine html CircosLink html CircosLollipop html CircosModuleList html CircosScatter html CircosSnp html CircosText html CircosWig html arcExample html bubbleExample html chord.pExample html chordExample html cnvExample html geneExample html heatmapExample html hg19_ideogram html histogramExample html lineExample html linkExample html lollipopExample html scatterExample html snpExample html wigExample html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'interacCircos' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'interacCircos' as interacCircos_1.2.0.zip * DONE (interacCircos) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'interacCircos' successfully unpacked and MD5 sums checked
interacCircos.Rcheck/examples_i386/interacCircos-Ex.timings
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interacCircos.Rcheck/examples_x64/interacCircos-Ex.timings
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