Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:07 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the gpart package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gpart.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 798/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
gpart 1.10.0 (landing page) Sun Ah Kim
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: gpart |
Version: 1.10.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/gpart_1.10.0.tar.gz && rm -rf gpart.buildbin-libdir && mkdir gpart.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpart.buildbin-libdir gpart_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL gpart_1.10.0.zip && rm gpart_1.10.0.tar.gz gpart_1.10.0.zip |
StartedAt: 2021-10-14 10:45:27 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 10:47:20 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 112.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/gpart_1.10.0.tar.gz && rm -rf gpart.buildbin-libdir && mkdir gpart.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpart.buildbin-libdir gpart_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL gpart_1.10.0.zip && rm gpart_1.10.0.tar.gz gpart_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 83 491k 83 410k 0 0 1208k 0 --:--:-- --:--:-- --:--:-- 1209k 100 491k 100 491k 0 0 1432k 0 --:--:-- --:--:-- --:--:-- 1431k install for i386 * installing *source* package 'gpart' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include' -I"c:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include' -I"c:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gpart_cpp.cpp -o gpart_cpp.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o gpart.dll tmp.def RcppExports.o gpart_cpp.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/gpart.buildbin-libdir/00LOCK-gpart/00new/gpart/libs/i386 ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gpart' finding HTML links ... done BigLD html CLQD html GPART html LDblockHeatmap html SNPinfo html convert2GRange html geneinfo html geno html gpart-package html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/gpart.buildbin-libdir/00LOCK-gpart/00new/gpart/help/gpart.html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'gpart' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gpart_cpp.cpp -o gpart_cpp.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o gpart.dll tmp.def RcppExports.o gpart_cpp.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/gpart.buildbin-libdir/gpart/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'gpart' as gpart_1.10.0.zip * DONE (gpart) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'gpart' successfully unpacked and MD5 sums checked