Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:06 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the gep2pep package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gep2pep.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 759/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
gep2pep 1.12.0 (landing page) Francesco Napolitano
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: gep2pep |
Version: 1.12.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/gep2pep_1.12.0.tar.gz && rm -rf gep2pep.buildbin-libdir && mkdir gep2pep.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gep2pep.buildbin-libdir gep2pep_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL gep2pep_1.12.0.zip && rm gep2pep_1.12.0.tar.gz gep2pep_1.12.0.zip |
StartedAt: 2021-10-14 09:20:08 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 09:20:59 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 51.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/gep2pep_1.12.0.tar.gz && rm -rf gep2pep.buildbin-libdir && mkdir gep2pep.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gep2pep.buildbin-libdir gep2pep_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL gep2pep_1.12.0.zip && rm gep2pep_1.12.0.tar.gz gep2pep_1.12.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 99858 100 99858 0 0 514k 0 --:--:-- --:--:-- --:--:-- 515k install for i386 * installing *source* package 'gep2pep' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gep2pep' finding HTML links ... done CategorizedCollection-class html CategorizedCollection html CondSEA html PathSEA html addSingleGeneSets html as.CategorizedCollection html buildPEPs html checkRepository html clearCache html createMergedRepository html createRepository html exportSEA html gene2pathways html gep2pep-package html getCollections html getDetails html getResults html importFromRawMode html importMSigDB.xml html loadCollection html loadESmatrix html loadPVmatrix html loadSampleGEP html loadSamplePWS html makeCollectionIDs html openRepository html setId2setName html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'gep2pep' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'gep2pep' as gep2pep_1.12.0.zip * DONE (gep2pep) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'gep2pep' successfully unpacked and MD5 sums checked