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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/geneRxCluster_1.28.0.tar.gz && rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL geneRxCluster_1.28.0.zip && rm geneRxCluster_1.28.0.tar.gz geneRxCluster_1.28.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 25061  100 25061    0     0   210k      0 --:--:-- --:--:-- --:--:--  212k

install for i386

* installing *source* package 'geneRxCluster' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"c:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c cluster.c -o cluster.o
cluster.c: In function 'cutptClean_new_elt':
cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
   if (*pvj!=NOTAIL)
      ^
cluster.c: In function 'gRxC_cluster':
cluster.c:682:2: warning: 'cutptFunRes' may be used uninitialized in this function [-Wmaybe-uninitialized]
  SET_VECTOR_ELT(final,2,cutptFunRes);
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o geneRxCluster.dll tmp.def cluster.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/geneRxCluster.buildbin-libdir/00LOCK-geneRxCluster/00new/geneRxCluster/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'geneRxCluster'
    finding HTML links ... done
    critVal.alpha                           html  
    critVal.power                           html  
    critVal.target                          html  
    gRxCluster-object                       html  
    finding level-2 HTML links ... done

    gRxCluster                              html  
    gRxPlot                                 html  
    gRxPlotClumps                           html  
    gRxSummary                              html  
    geneRxCluster                           html  
    noprune                                 html  
    plot.cutpoints                          html  
    prune.loglik                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'geneRxCluster' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c cluster.c -o cluster.o
cluster.c: In function 'cutptClean_new_elt':
cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
   if (*pvj!=NOTAIL)
      ^
cluster.c: In function 'gRxC_cluster':
cluster.c:682:2: warning: 'cutptFunRes' may be used uninitialized in this function [-Wmaybe-uninitialized]
  SET_VECTOR_ELT(final,2,cutptFunRes);
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o geneRxCluster.dll tmp.def cluster.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/geneRxCluster.buildbin-libdir/geneRxCluster/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'geneRxCluster' as geneRxCluster_1.28.0.zip
* DONE (geneRxCluster)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'geneRxCluster' successfully unpacked and MD5 sums checked