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This page was generated on 2021-10-15 15:06:05 -0400 (Fri, 15 Oct 2021).

INSTALL results for genArise on tokay2

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raw results

Package 705/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
genArise 1.68.0  (landing page)
IFC Development Team
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/genArise
git_branch: RELEASE_3_13
git_last_commit: b242c5b
git_last_commit_date: 2021-05-19 11:34:47 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: genArise
Version: 1.68.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/genArise_1.68.0.tar.gz && rm -rf genArise.buildbin-libdir && mkdir genArise.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=genArise.buildbin-libdir genArise_1.68.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL genArise_1.68.0.zip && rm genArise_1.68.0.tar.gz genArise_1.68.0.zip
StartedAt: 2021-10-14 07:06:33 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 07:07:26 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 53.0 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/genArise_1.68.0.tar.gz && rm -rf genArise.buildbin-libdir && mkdir genArise.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=genArise.buildbin-libdir genArise_1.68.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL genArise_1.68.0.zip && rm genArise_1.68.0.tar.gz genArise_1.68.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 26  167k   26 45689    0     0   293k      0 --:--:-- --:--:-- --:--:--  293k
100  167k  100  167k    0     0   741k      0 --:--:-- --:--:-- --:--:--  740k

install for i386

* installing *source* package 'genArise' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
Note: possible error in 'pdf(paste(name, ".pdf", ': unused argument (horiz = FALSE) 
Note: possible error in 'pdf(paste(name, ".pdf", ': unused argument (horiz = FALSE) 
Note: possible error in 'pdf(paste(name, "OriginalCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "OriginalRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "OriginalMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "CorrectedCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "CorrectedRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "CorrectedMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NormalCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NormalRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NormalMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "FilterCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "FilterRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "FilterMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NoDuplicatesCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NoDuplicatesRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NoDuplicatesMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "OriginalCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "OriginalRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "OriginalMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "CorrectedCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "CorrectedRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "CorrectedMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NormalCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NormalRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NormalMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "FilterCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "FilterRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "FilterMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NoDuplicatesCy3vsCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NoDuplicatesRvsI.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "NoDuplicatesMvsA.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(name, horiz = F, ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, ".pdf", ': unused argument (horiz = FALSE) 
Note: possible error in 'pdf(paste(name, "R&G.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "BgCy5.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "BgCy3.pdf", ': unused argument (horiz = F) 
Note: possible error in 'pdf(paste(name, "Swap.pdf", ': unused argument (horiz = F) 
** help
*** installing help indices
  converting help for package 'genArise'
    finding HTML links ... done
    DataSet-class                           html  
    Simon                                   html  
    Spot-class                              html  
    WT.dataset                              html  
    Zscore                                  html  
    Zscore.plot                             html  
    Zscore.points                           html  
    a.arise                                 html  
    alter.unique                            html  
    analysis.window                         html  
    annotations                             html  
    back.gui                                html  
    bg.correct                              html  
    classes                                 html  
    create.project                          html  
    cys.plot                                html  
    filter.spot                             html  
    genArise                                html  
    genArise.init                           html  
    genMerge                                html  
    get.Zscore                              html  
    get.values                              html  
    global.norm                             html  
    graphic.choose                          html  
    grid.norm                               html  
    help                                    html  
    i.arise                                 html  
    imageLimma                              html  
    m.arise                                 html  
    ma.plot                                 html  
    make.swap                               html  
    meanUnique                              html  
    note                                    html  
    old.project                             html  
    post.analysis                           html  
    principal                               html  
    projects.select                         html  
    r.arise                                 html  
    read.dataset                            html  
    read.spot                               html  
    reset.history                           html  
    ri.plot                                 html  
    set.grid.properties                     html  
    set.history.project                     html  
    set.path.project                        html  
    set.project.properties                  html  
    single.norm                             html  
    spotUnique                              html  
    swap.select                             html  
    trim                                    html  
    write.dataSet                           html  
    write.spot                              html  
    write.zscore                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'genArise' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'genArise' as genArise_1.68.0.zip
* DONE (genArise)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'genArise' successfully unpacked and MD5 sums checked