| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:05 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the flowCyBar package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/flowCyBar.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 649/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| flowCyBar 1.28.0 (landing page) Joachim Schumann
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: flowCyBar |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/flowCyBar_1.28.0.tar.gz && rm -rf flowCyBar.buildbin-libdir && mkdir flowCyBar.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowCyBar.buildbin-libdir flowCyBar_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL flowCyBar_1.28.0.zip && rm flowCyBar_1.28.0.tar.gz flowCyBar_1.28.0.zip |
| StartedAt: 2021-10-14 07:06:52 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 07:10:23 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 211.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/flowCyBar_1.28.0.tar.gz && rm -rf flowCyBar.buildbin-libdir && mkdir flowCyBar.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowCyBar.buildbin-libdir flowCyBar_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL flowCyBar_1.28.0.zip && rm flowCyBar_1.28.0.tar.gz flowCyBar_1.28.0.zip
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install for i386
* installing *source* package 'flowCyBar' ...
files 'build/vignette.rds', 'inst/doc/flowCyBar-manual.R', 'inst/doc/flowCyBar-manual.Rnw', 'inst/doc/flowCyBar-manual.bib', 'inst/doc/flowCyBar-manual.pdf' are missing
files 'DESCRIPTION', 'R/correlation.R', 'R/cybar_plot.R', 'R/nmds.R', 'R/normalize.R', 'man/correlation.Rd', 'man/cybar_plot.Rd', 'man/flowCyBar-package.Rd', 'man/nmds.Rd', 'man/normalize.Rd', 'vignettes/flowCyBar-manual.Rnw' have the wrong MD5 checksums
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'flowCyBar'
finding HTML links ... done
Abiotic_data_sample html
Cell_number_sample html
Corr_data_sample html
correlation html
cybar_plot html
flowCyBar-package html
nmds html
normalize html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'flowCyBar' ...
files 'build/vignette.rds', 'inst/doc/flowCyBar-manual.R', 'inst/doc/flowCyBar-manual.Rnw', 'inst/doc/flowCyBar-manual.bib', 'inst/doc/flowCyBar-manual.pdf' are missing
files 'DESCRIPTION', 'R/correlation.R', 'R/cybar_plot.R', 'R/nmds.R', 'R/normalize.R', 'man/correlation.Rd', 'man/cybar_plot.Rd', 'man/flowCyBar-package.Rd', 'man/nmds.Rd', 'man/normalize.Rd', 'vignettes/flowCyBar-manual.Rnw' have the wrong MD5 checksums
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowCyBar' as flowCyBar_1.28.0.zip
* DONE (flowCyBar)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'flowCyBar' successfully unpacked and MD5 sums checked