Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:40 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the fastseg package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/fastseg.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 619/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
fastseg 1.38.0 (landing page) Guenter Klambauer
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: fastseg |
Version: 1.38.0 |
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL fastseg |
StartedAt: 2021-10-14 06:07:40 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 06:07:51 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 10.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL fastseg ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’ * installing *source* package ‘fastseg’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c R_init_fastseg.c -o R_init_fastseg.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c segment.cpp -o segment.o segment.cpp: In function ‘SEXPREC* segment(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: segment.cpp:60:20: warning: variable ‘globalSd’ set but not used [-Wunused-but-set-variable] 60 | double globalMean,globalSd,diff,M2,globalVariance; | ^~~~~~~~ segment.cpp:61:9: warning: variable ‘oldStatistic’ set but not used [-Wunused-but-set-variable] 61 | double oldStatistic, meanLeft,meanRight,varLeft,varRight; | ^~~~~~~~~~~~ segment.cpp:62:31: warning: variable ‘maxStatistic’ set but not used [-Wunused-but-set-variable] 62 | double newStatistic,meanDiff,maxStatistic,DOF,a,b,eps1; | ^~~~~~~~~~~~ segment.cpp:63:40: warning: variable ‘maxIdx’ set but not used [-Wunused-but-set-variable] 63 | double newPValue, maxPValue,oldPValue,maxIdx; | ^~~~~~ In file included from segment.cpp:10: /home/biocbuild/bbs-3.13-bioc/R/include/Rmath.h:212:15: warning: unused variable ‘Rf_beta’ [-Wunused-variable] 212 | #define beta Rf_beta | ^~~~~~~ segment.cpp:65:9: note: in expansion of macro ‘beta’ 65 | double beta,nn; | ^~~~ g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c segmentCyberT.cpp -o segmentCyberT.o segmentCyberT.cpp: In function ‘SEXPREC* segmentCyberT(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: segmentCyberT.cpp:59:20: warning: variable ‘globalSd’ set but not used [-Wunused-but-set-variable] 59 | double globalMean,globalSd,diff,M2,globalVariance; | ^~~~~~~~ segmentCyberT.cpp:60:9: warning: variable ‘oldStatistic’ set but not used [-Wunused-but-set-variable] 60 | double oldStatistic,meanLeft,meanRight,varLeft,varRight; | ^~~~~~~~~~~~ segmentCyberT.cpp:61:31: warning: variable ‘maxStatistic’ set but not used [-Wunused-but-set-variable] 61 | double newStatistic,meanDiff,maxStatistic,DOF,a,b,eps1; | ^~~~~~~~~~~~ In file included from segmentCyberT.cpp:10: /home/biocbuild/bbs-3.13-bioc/R/include/Rmath.h:212:15: warning: unused variable ‘Rf_beta’ [-Wunused-variable] 212 | #define beta Rf_beta | ^~~~~~~ segmentCyberT.cpp:63:50: note: in expansion of macro ‘beta’ 63 | double newStatisticBptLeft,newStatisticBptRight,beta,nn; | ^~~~ g++ -std=gnu++14 -shared -L/home/biocbuild/bbs-3.13-bioc/R/lib -L/usr/local/lib -o fastseg.so R_init_fastseg.o segment.o segmentCyberT.o -L/home/biocbuild/bbs-3.13-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.13-bioc/R/library/00LOCK-fastseg/00new/fastseg/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastseg)