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This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the discordant package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/discordant.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 508/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
discordant 1.16.0 (landing page) Charlotte Siska
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: discordant |
Version: 1.16.0 |
Command: rm -rf discordant.buildbin-libdir && mkdir discordant.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=discordant.buildbin-libdir discordant_1.16.0.tar.gz |
StartedAt: 2021-10-15 09:00:16 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 09:01:32 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 76.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: discordant_1.16.0.zip |
PackageFileSize: 395.1 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf discordant.buildbin-libdir && mkdir discordant.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=discordant.buildbin-libdir discordant_1.16.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'discordant' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c discordant.c -o discordant.o discordant.c: In function 'em_normal_partial_concordant': discordant.c:21:13: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses] while(flag>0 & iter<(*iteration)){ ~~~~^~ discordant.c:147:13: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses] while(flag>0 & iter<(*iteration)){ ~~~~^~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o discordant.dll tmp.def discordant.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/discordant.buildbin-libdir/00LOCK-discordant/00new/discordant/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'discordant' finding HTML links ... done TCGA_Breast_RNASeq html TCGA_Breast_RNASeq_voom html TCGA_Breast_miRNASeq html TCGA_Breast_miRNASeq_voom html TCGA_GBM_miRNA_microarray html TCGA_GBM_transcript_microarray html createVectors html discordantRun html fishersTrans html split.MADOutlier html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'discordant' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c discordant.c -o discordant.o discordant.c: In function 'em_normal_partial_concordant': discordant.c:21:13: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses] while(flag>0 & iter<(*iteration)){ ~~~~^~ discordant.c:147:13: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses] while(flag>0 & iter<(*iteration)){ ~~~~^~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o discordant.dll tmp.def discordant.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/discordant.buildbin-libdir/discordant/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'discordant' as discordant_1.16.0.zip * DONE (discordant)