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This page was generated on 2021-10-15 15:06:33 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the cyanoFilter package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cyanoFilter.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 427/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
cyanoFilter 1.0.0 (landing page) Oluwafemi Olusoji
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: cyanoFilter |
Version: 1.0.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:cyanoFilter.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings cyanoFilter_1.0.0.tar.gz |
StartedAt: 2021-10-14 17:58:53 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 18:00:47 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 113.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: cyanoFilter.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:cyanoFilter.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings cyanoFilter_1.0.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.13-bioc/meat/cyanoFilter.Rcheck’ * using R version 4.1.1 (2021-08-10) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘cyanoFilter/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘cyanoFilter’ version ‘1.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘cyanoFilter’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
cyanoFilter.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL cyanoFilter ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’ * installing *source* package ‘cyanoFilter’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cyanoFilter)
cyanoFilter.Rcheck/cyanoFilter-Ex.timings
name | user | system | elapsed | |
MarginEvents | 3.553 | 0.194 | 3.791 | |
PhytoFilter | 0.916 | 0.046 | 0.966 | |
PhytopFilter | 1.323 | 0.049 | 1.377 | |
cellmargin | 0.498 | 0.021 | 0.522 | |
clusterExtract | 1.269 | 0.043 | 1.317 | |
clusterExtractp | 1.226 | 0.045 | 1.281 | |
debrisNc | 0.514 | 0.047 | 0.565 | |
fullFlowframe-MarginEvents-method | 0.458 | 0.029 | 0.489 | |
fullFlowframe-PhytopFilter-method | 1.002 | 0.036 | 1.042 | |
ggpairsDens | 3.217 | 0.089 | 3.311 | |
ggplotDens | 0.729 | 0.026 | 0.760 | |
ggplotDens2 | 1.133 | 0.033 | 1.171 | |
goodfcs | 0.027 | 0.003 | 0.030 | |
is.DebrisFilter | 0.000 | 0.001 | 0.001 | |
is.MarginEvents | 0 | 0 | 0 | |
is.PhytopFilter | 0 | 0 | 0 | |
lnTrans | 0.718 | 0.013 | 0.733 | |
newFlowframe | 0.320 | 0.056 | 0.378 | |
nona | 0.133 | 0.007 | 0.139 | |
noneg | 0.252 | 0.009 | 0.263 | |
oneDgate | 0.286 | 0.057 | 0.347 | |
pairsPlot | 2.588 | 0.165 | 2.756 | |
pigmentGate | 0.416 | 0.088 | 0.505 | |
reducedFlowframe-MarginEvents-method | 0.489 | 0.018 | 0.515 | |
reducedFlowframe | 0.509 | 0.018 | 0.532 | |
retain | 0.027 | 0.002 | 0.029 | |
rowNumbers | 0.330 | 0.065 | 0.397 | |
summaries-DebrisFilter-method | 0.436 | 0.018 | 0.458 | |
summaries-MarginEvents-method | 0.532 | 0.022 | 0.570 | |
summaries-PhytopFilter-method | 1.024 | 0.030 | 1.057 | |
summaries | 0.521 | 0.019 | 0.541 | |