James W. MacDonald
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/copa |
| git_branch: RELEASE_3_13 |
| git_last_commit: 6eea48b |
| git_last_commit_date: 2021-05-19 11:37:08 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:01 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the copa package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/copa.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 386/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| copa 1.60.0 (landing page) James W. MacDonald
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: copa |
| Version: 1.60.0 |
| Command: rm -rf copa.buildbin-libdir && mkdir copa.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copa.buildbin-libdir copa_1.60.0.tar.gz |
| StartedAt: 2021-10-15 08:44:15 -0400 (Fri, 15 Oct 2021) |
| EndedAt: 2021-10-15 08:45:28 -0400 (Fri, 15 Oct 2021) |
| EllapsedTime: 73.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: copa_1.60.0.zip |
| PackageFileSize: 205.3 KiB |
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### Running command:
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### rm -rf copa.buildbin-libdir && mkdir copa.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copa.buildbin-libdir copa_1.60.0.tar.gz
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install for i386
* installing *source* package 'copa' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c copa.c -o copa.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o copa.dll tmp.def copa.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/copa.buildbin-libdir/00LOCK-copa/00new/copa/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'copa'
finding HTML links ... done
copa html
copa.package html
copaFilter html
copaPerm html
copaTable html
getans html
pSum html
perm.mat html
plotCopa html
scatterPlotCopa html
summaryCopa html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'copa' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c copa.c -o copa.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o copa.dll tmp.def copa.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/copa.buildbin-libdir/copa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'copa' as copa_1.60.0.zip
* DONE (copa)