Jun Woo
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/ccfindR |
| git_branch: RELEASE_3_13 |
| git_last_commit: d3220ba |
| git_last_commit_date: 2021-05-19 12:35:26 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:36 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the ccfindR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ccfindR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 251/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ccfindR 1.12.0 (landing page) Jun Woo
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ccfindR |
| Version: 1.12.0 |
| Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL ccfindR |
| StartedAt: 2021-10-14 06:15:01 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 06:15:44 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 43.3 seconds |
| RetCode: 0 |
| Status: OK |
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###
### Running command:
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### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL ccfindR
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’
* installing *source* package ‘ccfindR’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:397,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
161 | template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
163 | template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
718 | struct palign_impl<Offset,Packet4f>
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
741 | struct palign_impl<Offset,Packet4i>
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
764 | struct palign_impl<Offset,Packet2d>
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
| ^
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:377,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter<Eigen::Matrix<double, -1, -1> >’
RcppExports.cpp:15:74: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter<Eigen::Matrix<double, -1, -1> >’
RcppExports.cpp:15:74: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include' -I/usr/local/include -fpic -g -O2 -Wall -c vbnmf_update.cpp -o vbnmf_update.o
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:397,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
161 | template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
163 | template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
718 | struct palign_impl<Offset,Packet4f>
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
741 | struct palign_impl<Offset,Packet4i>
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
764 | struct palign_impl<Offset,Packet2d>
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
| ^
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:377,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
vbnmf_update.cpp:20:14: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
vbnmf_update.cpp:20:14: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:34:35: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:34:47: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
vbnmf_update.cpp:34:47: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:35:60: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0>’
vbnmf_update.cpp:35:60: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> >’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>’
vbnmf_update.cpp:36:58: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:39:43: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, const Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:39:47: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
vbnmf_update.cpp:43:16: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1>’
vbnmf_update.cpp:43:50: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> >’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
vbnmf_update.cpp:44:34: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
vbnmf_update.cpp:46:64: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
vbnmf_update.cpp:53:16: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0>’
vbnmf_update.cpp:53:50: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> >’
vbnmf_update.cpp:53:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >’
vbnmf_update.cpp:53:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
vbnmf_update.cpp:69:52: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
vbnmf_update.cpp:69:53: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:74:30: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:76:15: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> > >’
vbnmf_update.cpp:77:31: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:78:11: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>’
vbnmf_update.cpp:78:16: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >’
vbnmf_update.cpp:78:21: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:445,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
960 | enum {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >; Functor = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 0> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>]’
vbnmf_update.cpp:53:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 1, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:496,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:106:40: required from ‘void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:301:81: required from ‘void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:353:66: required from ‘Eigen::internal::gemm_blocking_space<StorageOrder, _LhsScalar, _RhsScalar, MaxRows, MaxCols, MaxDepth, KcFactor, false>::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:485:18: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
391 | typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
| ^~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
392 | typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
| ^~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
393 | typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
| ^~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs<Scalar, Index, DataMapper, nr, 0, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; int nr = 4; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:193:21: required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1981 | PacketBlock<Packet,(PacketSize%4)==0?4:PacketSize> kernel;
| ^~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar = double]’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:196:15: required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:21: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1537 | const int SResPacketHalfSize = unpacket_traits<typename unpacket_traits<SResPacket>::half>::size;
| ^~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1592 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SResPacket>::half,SResPacket>::type SResPacketHalf;
| ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1593 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SLhsPacket>::type SLhsPacketHalf;
| ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1594 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SRhsPacket>::type SRhsPacketHalf;
| ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1595 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SAccPacket>::half,SAccPacket>::type SAccPacketHalf;
| ^~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:40: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:72: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, -1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:33:32: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:464:13: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:445,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum<ResultType>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:40: required from ‘const Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<ArgType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double>; int Direction = 1; Eigen::internal::evaluator<Eigen::PartialReduxExpr<ArgType, MemberOp, Direction> >::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:289:33: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
960 | enum {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum<ResultType>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; ResultType = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:40: required from ‘const Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<ArgType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double>; int Direction = 1; Eigen::internal::evaluator<Eigen::PartialReduxExpr<ArgType, MemberOp, Direction> >::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:289:33: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Product<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::Matrix<double, -1, -1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:78:21: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, 8>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum<ResultType>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:40: required from ‘const Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<ArgType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double>; int Direction = 1; Eigen::internal::evaluator<Eigen::PartialReduxExpr<ArgType, MemberOp, Direction> >::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:289:33: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Transpose<const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double>, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
vbnmf_update.cpp:43:62: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
650 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:496,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs<Scalar, Index, DataMapper, Pack1, Pack2, 1, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:182:17: required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1847 | PacketBlock<Packet> kernel;
| ^~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false>, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false, true>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:72: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 0>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true, true>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, 2>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:40: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:72: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:445,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:35:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
960 | enum {
| ^
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:269:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from vbnmf_update.cpp:3:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:76: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: required from ‘void Eigen::internal::generic_dense_assignment_kernel<DstEvaluatorTypeT, SrcEvaluatorTypeT, Functor, Version>::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Matrix<double, -1, -1> >; SrcEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >; Functor = Eigen::internal::assign_op<double, double>; int Version = 0; Eigen::Index = long int]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:5: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, -1> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
vbnmf_update.cpp:36:69: required from here
/home/biocbuild/bbs-3.13-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
650 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.13-bioc/R/lib -L/usr/local/lib -o ccfindR.so RcppExports.o vbnmf_update.o -lgsl -lgslcblas -L/home/biocbuild/bbs-3.13-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.13-bioc/R/library/00LOCK-ccfindR/00new/ccfindR/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
Loading required namespace: ccfindR
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ccfindR)