| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:05:59 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the bumphunter package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bumphunter.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 223/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| bumphunter 1.34.0 (landing page) Rafael A. Irizarry
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: bumphunter |
| Version: 1.34.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/bumphunter_1.34.0.tar.gz && rm -rf bumphunter.buildbin-libdir && mkdir bumphunter.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bumphunter.buildbin-libdir bumphunter_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL bumphunter_1.34.0.zip && rm bumphunter_1.34.0.tar.gz bumphunter_1.34.0.zip |
| StartedAt: 2021-10-14 10:17:34 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:18:28 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 54.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/bumphunter_1.34.0.tar.gz && rm -rf bumphunter.buildbin-libdir && mkdir bumphunter.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bumphunter.buildbin-libdir bumphunter_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL bumphunter_1.34.0.zip && rm bumphunter_1.34.0.tar.gz bumphunter_1.34.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
47 2274k 47 1084k 0 0 1386k 0 0:00:01 --:--:-- 0:00:01 1385k
100 2274k 100 2274k 0 0 1748k 0 0:00:01 0:00:01 --:--:-- 1749k
install for i386
* installing *source* package 'bumphunter' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'bumphunter'
finding HTML links ... done
TT html
annotateNearest html
annotateTranscripts html
bumphunter html
clusterMaker html
dummyData html
getSegments html
locfitByCluster html
loessByCluster html
matchGenes html
regionFinder html
runmedByCluster html
smoother html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'bumphunter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bumphunter' as bumphunter_1.34.0.zip
* DONE (bumphunter)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'bumphunter' successfully unpacked and MD5 sums checked