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This page was generated on 2021-10-15 15:06:28 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the bacon package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bacon.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 108/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
bacon 1.20.0 (landing page) Maarten van Iterson
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: bacon |
Version: 1.20.0 |
Command: rm -rf bacon.buildbin-libdir && mkdir bacon.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh bacon_1.20.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R bacon.buildbin-libdir |
StartedAt: 2021-10-15 01:38:32 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 01:39:37 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 64.8 seconds |
RetCode: 0 |
Status: OK |
PackageFile: bacon_1.20.0.tgz |
PackageFileSize: 1.919 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf bacon.buildbin-libdir && mkdir bacon.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh bacon_1.20.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R bacon.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=bacon.buildbin-libdir bacon_1.20.0.tar.gz' >>>>>>> * installing *source* package ‘bacon’ ... ** using staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c Rinit.c -o Rinit.o Rinit.c:11:3: warning: suggest braces around initialization of subobject [-Wmissing-braces] NULL ^~~~ { } /Library/Developer/CommandLineTools/usr/lib/clang/10.0.1/include/stddef.h:105:16: note: expanded from macro 'NULL' # define NULL ((void*)0) ^~~~~~~~~~ 1 warning generated. clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c bacon.c -o bacon.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o bacon.so Rinit.o bacon.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.13-bioc/meat/bacon.buildbin-libdir/00LOCK-bacon/00new/bacon/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bacon) >>>>>>> >>>>>>> FIXING LINKS FOR bacon.buildbin-libdir/bacon/libs/bacon.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgcc_s.1.dylib" "bacon.buildbin-libdir/bacon/libs/bacon.so" install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgfortran.5.dylib" "bacon.buildbin-libdir/bacon/libs/bacon.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libquadmath.0.dylib" "bacon.buildbin-libdir/bacon/libs/bacon.so"