Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:24 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the Sushi package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Sushi.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1875/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Sushi 1.30.0 (landing page) Douglas H Phanstiel
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
Package: Sushi |
Version: 1.30.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/Sushi_1.30.0.tar.gz && rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sushi.buildbin-libdir Sushi_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL Sushi_1.30.0.zip && rm Sushi_1.30.0.tar.gz Sushi_1.30.0.zip |
StartedAt: 2021-10-14 08:11:17 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 08:14:51 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 214.3 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/Sushi_1.30.0.tar.gz && rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sushi.buildbin-libdir Sushi_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL Sushi_1.30.0.zip && rm Sushi_1.30.0.tar.gz Sushi_1.30.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 4020k 0 15985 0 0 134k 0 0:00:29 --:--:-- 0:00:29 134k 46 4020k 46 1881k 0 0 1662k 0 0:00:02 0:00:01 0:00:01 1663k 100 4020k 100 4020k 0 0 2064k 0 0:00:01 0:00:01 --:--:-- 2065k install for i386 * installing *source* package 'Sushi' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Sushi' finding HTML links ... done SushiColors html Sushi_5C.bedpe html Sushi_ChIAPET_pol2.bedpe html Sushi_ChIPExo_CTCF.bedgraph html Sushi_ChIPSeq_CTCF.bedgraph html Sushi_ChIPSeq_pol2.bed html Sushi_ChIPSeq_pol2.bedgraph html Sushi_ChIPSeq_severalfactors.bed html Sushi_DNaseI.bedgraph html Sushi_GWAS.bed html Sushi_HiC.matrix html Sushi_RNASeq_K562.bedgraph html Sushi_genes.bed html Sushi_hg18_genome html Sushi_transcripts.bed html addlegend html chromOffsets html convertstrandinfo html labelgenome html labelplot html maptocolors html maptolwd html opaque html plotBed html plotBedgraph html plotBedpe html plotGenes html finding level-2 HTML links ... done plotHic html plotManhattan html sortChrom html zoombox html zoomsregion html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Sushi' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Sushi' as Sushi_1.30.0.zip * DONE (Sushi) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'Sushi' successfully unpacked and MD5 sums checked