Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:24 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the StructuralVariantAnnotation package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/StructuralVariantAnnotation.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1865/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
StructuralVariantAnnotation 1.8.2 (landing page) Daniel Cameron
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: StructuralVariantAnnotation |
Version: 1.8.2 |
Command: rm -rf StructuralVariantAnnotation.buildbin-libdir && mkdir StructuralVariantAnnotation.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=StructuralVariantAnnotation.buildbin-libdir StructuralVariantAnnotation_1.8.2.tar.gz |
StartedAt: 2021-10-15 12:02:54 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 12:04:25 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 91.5 seconds |
RetCode: 0 |
Status: OK |
PackageFile: StructuralVariantAnnotation_1.8.2.zip |
PackageFileSize: 831.8 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf StructuralVariantAnnotation.buildbin-libdir && mkdir StructuralVariantAnnotation.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=StructuralVariantAnnotation.buildbin-libdir StructuralVariantAnnotation_1.8.2.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'StructuralVariantAnnotation' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'StructuralVariantAnnotation' finding HTML links ... done StructuralVariantAnnotation html align_breakpoints html breakendRanges html breakpointGRangesToVCF html breakpointRanges html breakpointgr2bedpe html calculateReferenceHomology html countBreakpointOverlaps html elementExtract html extractBreakpointSequence html extractReferenceSequence html findBreakpointOverlaps html findInsDupOverlaps html findTransitiveCalls html hasPartner html isStructural html isSymbolic html numtDetect html pairs2breakpointgr html partner html rtDetect html simpleEventLength html simpleEventType html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'StructuralVariantAnnotation' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'StructuralVariantAnnotation' as StructuralVariantAnnotation_1.8.2.zip * DONE (StructuralVariantAnnotation)