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This page was generated on 2021-10-15 15:06:24 -0400 (Fri, 15 Oct 2021).

INSTALL results for STRINGdb on tokay2

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raw results

Package 1860/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
STRINGdb 2.4.2  (landing page)
Damian Szklarczyk
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/STRINGdb
git_branch: RELEASE_3_13
git_last_commit: 38baec2
git_last_commit_date: 2021-09-17 11:53:56 -0400 (Fri, 17 Sep 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: STRINGdb
Version: 2.4.2
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/STRINGdb_2.4.2.tar.gz && rm -rf STRINGdb.buildbin-libdir && mkdir STRINGdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STRINGdb.buildbin-libdir STRINGdb_2.4.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL STRINGdb_2.4.2.zip && rm STRINGdb_2.4.2.tar.gz STRINGdb_2.4.2.zip
StartedAt: 2021-10-14 08:02:54 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 08:04:07 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 73.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/STRINGdb_2.4.2.tar.gz && rm -rf STRINGdb.buildbin-libdir && mkdir STRINGdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STRINGdb.buildbin-libdir STRINGdb_2.4.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL STRINGdb_2.4.2.zip && rm STRINGdb_2.4.2.tar.gz STRINGdb_2.4.2.zip
###
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##############################################################################


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install for i386

* installing *source* package 'STRINGdb' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'STRINGdb'
    finding HTML links ... done
    STRINGdb-class                          html  
    add_diff_exp_color                      html  
    add_proteins_description                html  
    coeffOfvar                              html  
    delColDf                                html  
    diff_exp_example1                       html  
    downloadAbsentFile                      html  
    downloadAbsentFileSTRING                html  
    get_aliases                             html  
    get_annotations                         html  
    get_annotations_desc                    html  
    get_bioc_graph                          html  
    get_clusters                            html  
    get_enrichment                          html  
    get_graph                               html  
    get_homologs_besthits                   html  
    get_interactions                        html  
    get_link                                html  
    get_neighbors                           html  
    get_paralogs                            html  
    get_png                                 html  
    get_ppi_enrichment                      html  
    get_proteins                            html  
    get_subnetwork                          html  
    get_summary                             html  
    get_term_proteins                       html  
    interactions                            html  
    load                                    html  
    load_all                                html  
    map                                     html  
    mp                                      html  
    multi_map_df                            html  
    plot_network                            html  
    post_payload                            html  
    remove_homologous_interactions          html  
    renameColDf                             html  
    set_background                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'STRINGdb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'STRINGdb' as STRINGdb_2.4.2.zip
* DONE (STRINGdb)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'STRINGdb' successfully unpacked and MD5 sums checked