Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:20 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the Rnits package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rnits.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1615/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Rnits 1.26.0 (landing page) Dipen P. Sangurdekar
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: Rnits |
Version: 1.26.0 |
Command: chmod a+r Rnits -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rnits |
StartedAt: 2021-10-14 17:43:55 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 17:44:15 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 19.6 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r Rnits -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rnits ### ############################################################################## ############################################################################## * checking for file 'Rnits/DESCRIPTION' ... OK * preparing 'Rnits': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'Rnits-vignette.Rnw' using knitr trying URL 'https://ftp.ncbi.nlm.nih.gov/geo/series/GSE4nnn/GSE4158/matrix/GSE4158_series_matrix.txt.gz' Content type 'application/x-gzip' length 514853 bytes (502 KB) ================================================== downloaded 502 KB Warning: One or more parsing issues, see `problems()` for details Quitting from lines 90-114 (Rnits-vignette.Rnw) Error: processing vignette 'Rnits-vignette.Rnw' failed with diagnostics: invalid 'row.names' length --- failed re-building 'Rnits-vignette.Rnw' SUMMARY: processing the following file failed: 'Rnits-vignette.Rnw' Error: Vignette re-building failed. Execution halted