Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2021-10-15 15:06:20 -0400 (Fri, 15 Oct 2021).

INSTALL results for ROntoTools on tokay2

To the developers/maintainers of the ROntoTools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ROntoTools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1620/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ROntoTools 2.20.0  (landing page)
Calin Voichita
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/ROntoTools
git_branch: RELEASE_3_13
git_last_commit: b1691c3
git_last_commit_date: 2021-05-19 11:58:19 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ROntoTools
Version: 2.20.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ROntoTools_2.20.0.tar.gz && rm -rf ROntoTools.buildbin-libdir && mkdir ROntoTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ROntoTools.buildbin-libdir ROntoTools_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ROntoTools_2.20.0.zip && rm ROntoTools_2.20.0.tar.gz ROntoTools_2.20.0.zip
StartedAt: 2021-10-14 07:57:44 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 08:00:59 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 194.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ROntoTools_2.20.0.tar.gz && rm -rf ROntoTools.buildbin-libdir && mkdir ROntoTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ROntoTools.buildbin-libdir ROntoTools_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ROntoTools_2.20.0.zip && rm ROntoTools_2.20.0.tar.gz ROntoTools_2.20.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 35 1149k   35  403k    0     0  1202k      0 --:--:-- --:--:-- --:--:-- 1203k
100 1149k  100 1149k    0     0  1870k      0 --:--:-- --:--:-- --:--:-- 1868k

install for i386

* installing *source* package 'ROntoTools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ROntoTools'
    finding HTML links ... done
    KEGGpathway2Graph                       html  
    Summary-pDisRes-method                  html  
    Summary-peRes-method                    html  
    alpha1MR                                html  
    alphaMLG                                html  
    compute.fisher                          html  
    compute.normalInv                       html  
    keggPathwayGraphs                       html  
    finding level-2 HTML links ... done

    keggPathwayNames                        html  
    nodeWeights                             html  
    pDis                                    html  
    pDisPathway-class                       html  
    pDisRes-class                           html  
    pe                                      html  
    peEdgeRenderInfo                        html  
    peNodeRenderInfo                        html  
    pePathway-class                         html  
    peRes-class                             html  
    plot.pePathway-methods                  html  
    plot.peRes-methods                      html  
    setEdgeWeights                          html  
    setNodeWeights                          html  
    subGraphByNodeType                      html  
    summary.pDisRes                         html  
    summary.peRes                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ROntoTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ROntoTools' as ROntoTools_2.20.0.zip
* DONE (ROntoTools)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ROntoTools' successfully unpacked and MD5 sums checked