Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:18 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the RCAS package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RCAS.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1515/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
RCAS 1.18.0 (landing page) Bora Uyar
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: RCAS |
Version: 1.18.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/RCAS_1.18.0.tar.gz && rm -rf RCAS.buildbin-libdir && mkdir RCAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCAS.buildbin-libdir RCAS_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RCAS_1.18.0.zip && rm RCAS_1.18.0.tar.gz RCAS_1.18.0.zip |
StartedAt: 2021-10-14 10:33:26 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 10:34:44 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 78.5 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/RCAS_1.18.0.tar.gz && rm -rf RCAS.buildbin-libdir && mkdir RCAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCAS.buildbin-libdir RCAS_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL RCAS_1.18.0.zip && rm RCAS_1.18.0.tar.gz RCAS_1.18.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1646k 100 1646k 0 0 2903k 0 --:--:-- --:--:-- --:--:-- 2908k install for i386 * installing *source* package 'RCAS' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' ** help *** installing help indices converting help for package 'RCAS' finding HTML links ... done calculateCoverageProfile html calculateCoverageProfileFromTxdb html calculateCoverageProfileList html calculateCoverageProfileListFromTxdb html checkSeqDb html createControlRegions html createDB html createOrthologousGeneSetList html deleteSampleDataFromDB html discoverFeatureSpecificMotifs html extractSequences html findDifferentialMotifs html findEnrichedFunctions html generateKmers html getFeatureBoundaryCoverage html getFeatureBoundaryCoverageBin html getFeatureBoundaryCoverageMulti html getIntervalOverlapMatrix html getMotifSummaryTable html getTargetedGenesTable html getTxdbFeatures html getTxdbFeaturesFromGRanges html gff html importBed html importBedFiles html importGtf html parseMsigdb html plotFeatureBoundaryCoverage html printMsigdbDataset html queryGff html queryRegions html retrieveOrthologs html runGSEA html runMotifDiscovery html runMotifRG html runReport html runReportMetaAnalysis html runTopGO html summarizeDatabaseContent html summarizeQueryRegions html summarizeQueryRegionsMulti html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' ** testing if installed package can be loaded from final location Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RCAS' ... ** testing if installed package can be loaded Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' * MD5 sums packaged installation of 'RCAS' as RCAS_1.18.0.zip * DONE (RCAS) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'RCAS' successfully unpacked and MD5 sums checked